Pairwise Alignments

Query, 256 a.a., spermidine/putrescine ABC transporter permease PotC from Vibrio cholerae E7946 ATCC 55056

Subject, 264 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  148 bits (374), Expect = 1e-40
 Identities = 75/242 (30%), Positives = 135/242 (55%), Gaps = 1/242 (0%)

Query: 5   IRFSFMSLVYLFLYLPIIVLIANSFN-ENKFGIKWGGFTTKWYHALMNNDSLMQAAWHSI 63
           +   F  +V LF+  P++V+   +F  EN   +   GF+ +W+ A+      +QA ++S+
Sbjct: 7   LALGFHGVVVLFMMAPLVVVCLVAFTPENTLSLPTSGFSLRWFRAVFERADFIQAFYNSL 66

Query: 64  NVAVFSATAATLIGSLTAVALFRYQFKGKKVVSGMLFVVMMSPDIVMAISLLALFLVMGA 123
            +A  +AT ATLI    A+A+ RY F G+   S +    ++ P +V+ +++L LF +MG 
Sbjct: 67  ILAFTAATLATLIAVPAALAISRYTFPGRNFFSALFLSPIIIPHLVLGVAMLRLFALMGV 126

Query: 124 KLGFFTLLIAHITFCLPFVVVTVYTRLNGFDVKMLEAAKDLGAGEWVILKKIILPLAKPA 183
              F  L++AH+    P+V+  V     G D    +AA+ LGA  + + ++I LP+  P 
Sbjct: 127 NGSFTWLMLAHVVIITPYVLRLVLAAAIGIDRSAEQAAESLGASRFTLFRQITLPMILPG 186

Query: 184 VAAGWLLSFTLSLDDVIISSFVTGPTYEILPLKIYSMVKVGISPEVNALATVMLVVSLVL 243
           VA GWLL+F  S D+V +S FV+ P  + LP+++Y      I P + A++ +++ ++   
Sbjct: 187 VAGGWLLAFINSFDEVTLSIFVSSPATQTLPVRMYVYATESIDPMMAAVSALVIALTAAT 246

Query: 244 VV 245
           ++
Sbjct: 247 MI 248