Pairwise Alignments

Query, 256 a.a., spermidine/putrescine ABC transporter permease PotC from Vibrio cholerae E7946 ATCC 55056

Subject, 269 a.a., spermidine/putrescine ABC transporter permease from Pseudomonas simiae WCS417

 Score =  139 bits (349), Expect = 8e-38
 Identities = 78/241 (32%), Positives = 135/241 (56%), Gaps = 4/241 (1%)

Query: 15  LFLYLPIIVLIANSFN--ENKFGIKWGGFTTKWYHALMNNDSLMQAAWHSINVAVFSATA 72
           +FL+ PI+++   +FN  E  F     GFT KW+        +++A   S+ +A  +   
Sbjct: 19  VFLHFPILIIFLYAFNTEEAAFSFPPQGFTLKWFSVAFARPDVLEAIKLSLQIAAIATLI 78

Query: 73  ATLIGSLTAVALFRYQFKGKKVVSGMLFVVMMSPDIVMAISLLALFLVMGAKLGFFTLLI 132
           A ++G+L + AL+R +F GK+ VS ML + +  P I+  I+LLA F  +G + G FT+++
Sbjct: 79  AMVLGTLASAALYRREFFGKQGVSLMLILPIALPGIITGIALLATFKTLGIEPGMFTIIV 138

Query: 133 AHITFCLPFVVVTVYTRLNGFDVKMLEAAKDLGAGEWVILKKIILPLAKPAVAAGWLLSF 192
            H TFC+  V   V  RL      ++EA+ DLGA  W   + II+P    A+ AG +L+F
Sbjct: 139 GHATFCVVIVYNNVIARLRRTSHSLIEASMDLGADGWQTFRYIIMPNLGSALLAGGMLAF 198

Query: 193 TLSLDDVIISSFVTGPTYEILPLKIYSMV-KVGISPEVNALATVMLVVSLVLVVASQLLA 251
            LS D++I+++F  G     LPL + + + +    P  N +A ++++V++  ++ +  L 
Sbjct: 199 ALSFDEIIVTTFTAGHE-RTLPLWLLNQLSRPRDVPVTNVVAMLVMLVTMFPILGAYYLT 257

Query: 252 R 252
           R
Sbjct: 258 R 258