Pairwise Alignments

Query, 256 a.a., spermidine/putrescine ABC transporter permease PotC from Vibrio cholerae E7946 ATCC 55056

Subject, 272 a.a., ABC transporter permease subunit from Rhizobium sp. OAE497

 Score =  240 bits (612), Expect = 3e-68
 Identities = 115/257 (44%), Positives = 183/257 (71%), Gaps = 3/257 (1%)

Query: 1   MGRSIRFSFMSLV--YLFLYLPIIVLIANSFNENKFGIKWGGFTTKWYHALMNNDSLMQA 58
           M R  RF+ +S+   + FLYLPI++L+  SFNE+K    WGGF+TKWY +LM+ND+L+ A
Sbjct: 1   MLRWTRFNIISVTLGFAFLYLPIVLLVIFSFNESKLVTVWGGFSTKWYVSLMHNDALLDA 60

Query: 59  AWHSINVAVFSATAATLIGSLTAVALFRY-QFKGKKVVSGMLFVVMMSPDIVMAISLLAL 117
           AW ++ V V SATAAT++G+L A+ L R+ +F+G+ + SGM++  ++ P+++  +SLL L
Sbjct: 61  AWVTVRVGVLSATAATILGTLAAITLVRHTRFRGRMLFSGMVYAPLVMPEVITGLSLLLL 120

Query: 118 FLVMGAKLGFFTLLIAHITFCLPFVVVTVYTRLNGFDVKMLEAAKDLGAGEWVILKKIIL 177
           F+ +G   GF+T+ +AH T  + FV V V +RL  FD  + EAA+DLGA       ++ L
Sbjct: 121 FVAIGLDRGFWTITLAHTTLTMCFVAVVVQSRLMSFDQSIEEAAQDLGAPPVRTFFEVTL 180

Query: 178 PLAKPAVAAGWLLSFTLSLDDVIISSFVTGPTYEILPLKIYSMVKVGISPEVNALATVML 237
           P+  PAV +GW+L+FTLSLDD++I+SF +GP    LP++IYS V++G++PE+NA+ T+++
Sbjct: 181 PIIAPAVFSGWILAFTLSLDDLVIASFTSGPGATTLPMRIYSQVRLGVTPEINAVCTILI 240

Query: 238 VVSLVLVVASQLLAREK 254
            V  V V+A+ ++ + +
Sbjct: 241 AVVAVGVIAASVITKRR 257