Pairwise Alignments

Query, 256 a.a., spermidine/putrescine ABC transporter permease PotC from Vibrio cholerae E7946 ATCC 55056

Subject, 264 a.a., spermidine/putrescine ABC transporter membrane protein (NCBI) from Escherichia coli BW25113

 Score =  396 bits (1017), Expect = e-115
 Identities = 193/256 (75%), Positives = 232/256 (90%)

Query: 1   MGRSIRFSFMSLVYLFLYLPIIVLIANSFNENKFGIKWGGFTTKWYHALMNNDSLMQAAW 60
           +GR +R  FM+ +Y +LY+PII+LI NSFN ++FGI W GFTTKWY  LMNNDSL+QAA 
Sbjct: 2   IGRLLRGGFMTAIYAYLYIPIIILIVNSFNSSRFGINWQGFTTKWYSLLMNNDSLLQAAQ 61

Query: 61  HSINVAVFSATAATLIGSLTAVALFRYQFKGKKVVSGMLFVVMMSPDIVMAISLLALFLV 120
           HS+ +AVFSAT ATLIGSLTAVAL+RY+F+GK  VSGMLFVVMMSPDIVMAISLL LF++
Sbjct: 62  HSLTMAVFSATFATLIGSLTAVALYRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFML 121

Query: 121 MGAKLGFFTLLIAHITFCLPFVVVTVYTRLNGFDVKMLEAAKDLGAGEWVILKKIILPLA 180
           +G +LGF++LL +HITFCLPFVVVTVY+RL GFDV+MLEAAKDLGA E+ IL+KIILPLA
Sbjct: 122 LGIQLGFWSLLFSHITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLA 181

Query: 181 KPAVAAGWLLSFTLSLDDVIISSFVTGPTYEILPLKIYSMVKVGISPEVNALATVMLVVS 240
            PAVAAGW+LSFTLS+DDV++SSFVTGP+YEILPLKIYSMVKVG+SPEVNALAT++LV+S
Sbjct: 182 MPAVAAGWVLSFTLSMDDVVVSSFVTGPSYEILPLKIYSMVKVGVSPEVNALATILLVLS 241

Query: 241 LVLVVASQLLAREKVK 256
           LV+V+ASQL+AR+K K
Sbjct: 242 LVMVIASQLIARDKTK 257