Pairwise Alignments

Query, 256 a.a., spermidine/putrescine ABC transporter permease PotC from Vibrio cholerae E7946 ATCC 55056

Subject, 272 a.a., ABC transporter permease from Dickeya dianthicola ME23

 Score =  152 bits (383), Expect = 9e-42
 Identities = 78/243 (32%), Positives = 136/243 (55%), Gaps = 1/243 (0%)

Query: 15  LFLYLPIIVLIANSFNENKF-GIKWGGFTTKWYHALMNNDSLMQAAWHSINVAVFSATAA 73
           LFL +P++V++  SFN   F      GF+ +WY    ++   + A  +S+ +A  +   A
Sbjct: 25  LFLIVPVLVIVPLSFNAGSFLSYPLAGFSLRWYREFFHSSEWLSALGNSLLIAPLATALA 84

Query: 74  TLIGSLTAVALFRYQFKGKKVVSGMLFVVMMSPDIVMAISLLALFLVMGAKLGFFTLLIA 133
           T +G L +V L R +F+GK +V  +L   M++P +++A+ +   F  +     +  L++A
Sbjct: 85  TGLGVLASVGLVRGEFRGKSLVMAVLISPMIAPVVIVAVGMFFFFAKLSLLNSYIGLVLA 144

Query: 134 HITFCLPFVVVTVYTRLNGFDVKMLEAAKDLGAGEWVILKKIILPLAKPAVAAGWLLSFT 193
           H    +PFVV+TV   L  +D  +  AA  LGA   +  +K+ LPL  P V +G L +F 
Sbjct: 145 HAVLGVPFVVITVTAVLKNYDQNLTRAAASLGAPPLLAFRKVTLPLIAPGVFSGALFAFA 204

Query: 194 LSLDDVIISSFVTGPTYEILPLKIYSMVKVGISPEVNALATVMLVVSLVLVVASQLLARE 253
            S D+VI++ F+  P    LPL++++ ++  + P + A AT+M+  +LVL+V  ++L R 
Sbjct: 205 TSFDEVIVTLFLASPRQRTLPLQMFAGIRENLDPTIAAAATMMVSAALVLLVVMEVLRRR 264

Query: 254 KVK 256
             K
Sbjct: 265 SEK 267