Pairwise Alignments

Query, 256 a.a., spermidine/putrescine ABC transporter permease PotC from Vibrio cholerae E7946 ATCC 55056

Subject, 285 a.a., ABC transporter membrane spanning protein (mannopine) from Agrobacterium fabrum C58

 Score =  120 bits (301), Expect = 3e-32
 Identities = 71/243 (29%), Positives = 127/243 (52%), Gaps = 1/243 (0%)

Query: 9   FMSLVYLFLYLPIIVLIANSFNENKF-GIKWGGFTTKWYHALMNNDSLMQAAWHSINVAV 67
           F+ L+ +FL LP  +++  S N+  +      G T KWY A  ++   M A   S+ VA 
Sbjct: 37  FVFLITVFLILPTFLVVPMSLNDGSYLAFPPQGLTLKWYRAYFSDPDWMSATLFSLQVAF 96

Query: 68  FSATAATLIGSLTAVALFRYQFKGKKVVSGMLFVVMMSPDIVMAISLLALFLVMGAKLGF 127
            +A  AT IG+  A+AL + +   K ++  +    M+ P +V+ +SL  +F        F
Sbjct: 97  ATAIVATTIGTTAALALAKSRLPFKGLLQSLALGPMIVPHVVLGVSLYLVFSPWRVTGTF 156

Query: 128 FTLLIAHITFCLPFVVVTVYTRLNGFDVKMLEAAKDLGAGEWVILKKIILPLAKPAVAAG 187
              ++AH    +P+V++ V   +  FD  +  AA + GA  +     ++LP   P+VAA 
Sbjct: 157 AGFVLAHTVLAIPYVMIVVGAAVQKFDPSLELAALNCGANRFQSFFLVMLPNIGPSVAAA 216

Query: 188 WLLSFTLSLDDVIISSFVTGPTYEILPLKIYSMVKVGISPEVNALATVMLVVSLVLVVAS 247
            + +F  S DD  +S F++    + +  K++  +   ++P + A +TV++ +SLVL+ A+
Sbjct: 217 SVFAFLASFDDATVSFFISDIGGKSIGRKMFEDIDFNLTPVIAAASTVLVAISLVLMTAA 276

Query: 248 QLL 250
           QLL
Sbjct: 277 QLL 279