Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 364 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  159 bits (403), Expect = 8e-44
 Identities = 101/307 (32%), Positives = 163/307 (53%), Gaps = 19/307 (6%)

Query: 6   TLLAGSACALSLLSGTAAAEDKELVFMNWGPYINSGILEQFTKETGIKVIYSTYESNETL 65
           TLLA S   +  ++G A A+DK L   NW  YI    +  F KE+GIKV+Y  ++SNETL
Sbjct: 7   TLLALSL--MGAMAGAAQADDKVLHVYNWSDYIAPDTIANFEKESGIKVVYDVFDSNETL 64

Query: 66  YAKLKTHNQGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLDSNYLD--KPYDPNND 123
            AKL     GYD+VVPS  F+AK    G+ Q++DKSKLSN+ NL+ + L      DP+N 
Sbjct: 65  EAKLLAGKSGYDIVVPSNNFLAKQIKAGVYQELDKSKLSNYDNLNKSLLKAVSVSDPDNK 124

Query: 124 YSIPHVVAITGLAVNTDMYDP----NDFQSWGDLWKPELKGQL-----MLMDDTREVFHI 174
           ++ P++    G+  N +        +   SW  L KPE   +L       +D   E+  +
Sbjct: 125 HAFPYMWGSIGIGYNPEKVKAALGVDKIDSWDVLLKPENIAKLKSCGVSFLDSPTEMLPV 184

Query: 175 ALRKLGYSGNSTDDKQIDEAYAELQKLMPNVLVFNSDNPAAPYLSGEVGLGMLWNG---- 230
           AL  LG   ++     + +A     K+ P++  F+S    +   +G + + + ++G    
Sbjct: 185 ALHYLGLPTDTQKKADLKQAEDLFLKIRPSIGYFHSSKYISDLANGNICVAVGYSGDIEQ 244

Query: 231 SAAAAQKEGLPIKLVF--PKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAEQISR 288
           + + A + G  +K+ +  PKEG   + D  AI   A+NVDAA+K +++LL+P++  +I+ 
Sbjct: 245 AKSRAAEAGGKVKVAYDIPKEGAGSFFDMVAIPKDAENVDAAYKFMNYLLKPQVMAEITN 304

Query: 289 DTGYLTG 295
              +  G
Sbjct: 305 SVHFPNG 311