Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 359 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  149 bits (375), Expect = 1e-40
 Identities = 104/328 (31%), Positives = 162/328 (49%), Gaps = 25/328 (7%)

Query: 15  LSLLSGTAAAEDKELVFMNWGPYINSGILEQFTKETGIKVIYSTYESNETLYAKLKTHNQ 74
           L L++    A +   ++ NW  YI     + F KETGI   Y  Y+SNETL  KL T   
Sbjct: 9   LMLVASIGQAAETVKIY-NWSDYIAPDTTKNFQKETGIGFTYDVYDSNETLDGKLMTGKS 67

Query: 75  GYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLDSNYLD--KPYDPNNDYSIPHVVAI 132
           GYD+V PS +F+A+    G L+K+DKS+L N+KNL+   L   +  DP N +  P++   
Sbjct: 68  GYDVVFPSNHFMARQIQGGALKKLDKSQLPNWKNLNPVLLKALENNDPGNAHGFPYLWGS 127

Query: 133 TGLAVNTD-----MYDPNDFQSWGDLWKPELKGQLM-----LMDDTREVFHIALRKLGYS 182
           TG+  N D     + D     SW  ++KPE   +L      ++D+  E+   AL  LG  
Sbjct: 128 TGIGYNIDKVKAVLGDNAPVDSWDLIFKPENMAKLQKCGVAILDNGPELLPAALNYLGLP 187

Query: 183 GNSTDDKQIDEAYAELQKLMPNVLVFNSDNPAAPYLSGEVGLGMLWNG------SAAAAQ 236
            +S   +   +A   L K+ P V  F+S    A   +G++ + + ++G      S A   
Sbjct: 188 HHSKKPEDYKKAEDLLMKVRPYVAYFHSSKYTADLANGDICVAVGFSGDILQAESRAKEA 247

Query: 237 KEGLPIKLVFPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAEQISRDTGYLTGV 296
           K G+ I    PKEG   W D  A+ + A N  A +  +++LLRP++   I+    Y  G 
Sbjct: 248 KNGVNIGYNIPKEGAAIWFDMVAMPADAPNEAAGYAFMNYLLRPQVMASITNYVHYANGN 307

Query: 297 KASNDKFQDVA-----PLFPSQEDLDRV 319
           +A+ D   D A      ++PS E + ++
Sbjct: 308 QAA-DSLVDPAIKADTKIYPSPEMMGKL 334