Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  251 bits (641), Expect = 2e-71
 Identities = 133/343 (38%), Positives = 205/343 (59%), Gaps = 8/343 (2%)

Query: 4   LATLLAGSACALSLLSGTAAAEDKELVFMNWGPYINSGILEQFTKETGIKVIYSTYESNE 63
           + T + G   +  + S    AE    V+  WG Y+    L+ F ++ G+ + YST+E+NE
Sbjct: 1   MKTFIKGLVLSAVVASSQVYAEQTLNVYA-WGGYLPEKSLKAFEQQEGVTINYSTFENNE 59

Query: 64  TLYAKLKT-HNQGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLDSNYLDKPYDPNN 122
           ++Y KLK     GYD+V  S YF+ KM  EG+L +ID +++ N K+     L   +DP N
Sbjct: 60  SMYTKLKLLKGTGYDVVFASAYFIEKMGREGLLAEIDHNQIPNMKDAMPTVLGLAHDPQN 119

Query: 123 DYSIPHVVAITGLAVNTDMYDPNDFQSWGDLWKPELKGQLMLMDDTREVFHIALRKLGYS 182
            +S+P++  ITGL  N+    PN    W DLW  + + Q+ML+DD R+VF +AL+  G+S
Sbjct: 120 KFSLPYIWGITGLYYNSSTL-PNGITKWADLWDKQYEQQVMLIDDIRDVFGMALKLNGFS 178

Query: 183 GNSTDDKQIDEAYAELQKLMPNVLVFNSDNPAAPYLSGEVGLGMLWNGSAAAAQKEGLPI 242
            N+ ++++I +AY  L  L  NVL++NSD P  PY+SGE  LGM WNG+A   Q E   +
Sbjct: 179 INTKNEEEIKKAYESLVALKKNVLLYNSDAPHVPYVSGEATLGMQWNGNAYQGQVEMPEL 238

Query: 243 KLVFPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAEQISRDTGYLTGVKASN-- 300
           K V P+EG + W+DNF I SG+KN+  AHK I+F+ +PE   +I +  GY +  K     
Sbjct: 239 KFVMPEEGAVLWMDNFTIPSGSKNIPLAHKFINFMYQPENQAEIVQSLGYASATKGGRAL 298

Query: 301 --DKFQDVAPLFPSQEDLDRVEWQSAVGDKTVK-YEEYFMKLK 340
              + +D   +FPS ED+ + E+ + VG +T+  YE+Y+ +L+
Sbjct: 299 LPAELRDNPTIFPSDEDMKKGEFINDVGPETLAIYEKYWQRLR 341