Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 364 a.a., spermidine/putrescine ABC transporter - periplasmic subunit from Pseudomonas putida KT2440

 Score =  169 bits (428), Expect = 1e-46
 Identities = 119/359 (33%), Positives = 175/359 (48%), Gaps = 26/359 (7%)

Query: 7   LLAGSACALSLLSGTAAAEDKELVFMNWGPYINSGILEQFTKETGIKVIYSTYESNETLY 66
           L+AG+   L+L     AA      F NW  YI    L  F K TGIK +   ++SNETL 
Sbjct: 10  LMAGAG--LTLACSVQAAPTVH--FYNWSDYIGPTTLADFEKATGIKPVQDVFDSNETLE 65

Query: 67  AKLKTHNQGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLDSNYLDK--PYDPNNDY 124
            KL   N GYD+VVPS +F+ K    G  QK+DK+ L N+ NLD   + +    DP N Y
Sbjct: 66  GKLLAGNTGYDVVVPSNHFLGKQIKAGAFQKLDKNLLPNYSNLDPALMKRLEKNDPGNQY 125

Query: 125 SIPHVVAITGLAVNTDMYDP----NDFQSWGDLWKPE-----LKGQLMLMDDTREVFHIA 175
           ++P++    G+  N D        +   SW  L++PE      K  +  +D   E+    
Sbjct: 126 AVPYLWGTNGIGYNVDKVKAALGVDTIDSWAVLFEPENMKKLSKCGVAFLDSADEMLPAV 185

Query: 176 LRKLGYSGNSTDDKQIDEAYAELQKLMPNVLVFNSDNPAAPYLSGEVGLGMLWNGSAAAA 235
           L  +G + NSTD K   +A  +L  + P V  F+S        +G++ +   ++G    A
Sbjct: 186 LNYMGLNPNSTDPKDYAKAEQKLLAVRPYVTYFHSSKYITDLANGDICVAAGFSGDVFQA 245

Query: 236 Q------KEGLPIKLVFPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAEQISRD 289
           +      K+G+ +    PKEGG  W D  AI   AKNV  AH  I++LL+PE+  Q+S  
Sbjct: 246 KARAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAKNVKEAHAFINYLLKPEVIAQVSDY 305

Query: 290 TGYLT-GVKASNDKFQDV---APLFPSQEDLDRVEWQSAVGDKTVK-YEEYFMKLKAGQ 343
            GY     KA     Q V   A ++P QE LD++   S +  K  +     + K+K+G+
Sbjct: 306 VGYANPNPKAGALMDQAVRTDAAVYPPQEVLDKMFVNSELPPKVQRLMTRSWTKVKSGK 364