Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 359 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score =  144 bits (364), Expect = 3e-39
 Identities = 91/297 (30%), Positives = 147/297 (49%), Gaps = 18/297 (6%)

Query: 17  LLSGTAAAEDKELVFMNWGPYINSGILEQFTKETGIKVIYSTYESNETLYAKLKTHNQGY 76
           +L+ + A+  + +   NW  Y+    L+ F + +GI   Y  Y+SNETL  KL T N GY
Sbjct: 10  MLAASVASAAETVKIYNWSSYVAPDTLKNFQQASGIVPTYDVYDSNETLDGKLMTGNSGY 69

Query: 77  DLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLDSNYLD--KPYDPNNDYSIPHVVAITG 134
           D+V PS +F+A+      L+++DKSKL N+ NL+   L   +  DP N Y  P++   TG
Sbjct: 70  DVVFPSNHFMARQIQGKALKRLDKSKLPNWHNLNPVLLKALEVNDPGNQYGFPYLWGSTG 129

Query: 135 LAVNTD-----MYDPNDFQSWGDLWKPELKGQL-----MLMDDTREVFHIALRKLGYSGN 184
           +  N D     + D     SW  ++KPE   +L      ++D+  E+  IAL  LG   +
Sbjct: 130 IGYNIDKVKAVLGDNAPVDSWDLIFKPEYMSKLKSCGVAVLDNGPELLPIALHYLGLPHH 189

Query: 185 STDDKQIDEAYAELQKLMPNVLVFNSDNPAAPYLSGEVGLGMLWNGSAAAAQ------KE 238
           S D K  ++A   L K+ P +  F+S        +G++ + + ++G    A+        
Sbjct: 190 SQDPKDYEKAKDLLMKVRPYISYFHSSKYTGDLANGDICVVVGFSGDVLQAKNRADEANN 249

Query: 239 GLPIKLVFPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAEQISRDTGYLTG 295
           G+ +    PKEG   W D  A+   A +  A +  +++LL+PE+   IS    Y  G
Sbjct: 250 GVKVGYSIPKEGAPMWFDMVAMPVDAPDEKAGYAYMNYLLQPEVMANISNHVQYANG 306