Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 373 a.a., polyamine ABC transporter substrate-binding protein from Paraburkholderia sabiae LMG 24235

 Score =  140 bits (353), Expect = 5e-38
 Identities = 108/365 (29%), Positives = 168/365 (46%), Gaps = 32/365 (8%)

Query: 5   ATLLAGSACALSLLSGTAA-AEDKELVFMNWGPYINSGILEQFTKETGIKVIYSTYESNE 63
           A LLA  A  ++ LS T A A D EL   NW  YI    +  F K+TGI V Y  Y+S++
Sbjct: 13  AALLA--AAGITGLSATPAHAADTELNVYNWSDYIAKDTIPNFEKQTGIHVKYDNYDSDD 70

Query: 64  TLYAKLKTHNQGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLDSNY--LDKPYDPN 121
           TL AKL   + GYD+VVP++ ++AK    G+ QK+DK+++ N KNLD     L    DP 
Sbjct: 71  TLQAKLLAGSSGYDIVVPTSNYMAKQIQAGVYQKLDKTQIPNLKNLDPTLMKLIADADPG 130

Query: 122 NDYSIPHVVAITGLAVNTDMYDP-----NDFQSWGDLWKPELKGQL-----MLMDDTREV 171
           N Y +P      G+  N               SW  ++ P    +L       +D   +V
Sbjct: 131 NQYGVPWAYGTDGIGYNVQAVQKVLGANAPVDSWSLVFDPANLSKLKSCGVSFLDQAVDV 190

Query: 172 FHIALRKLGYSGNSTDDKQIDEAYAELQKLMPNVLVFNSDNPAAPYLSGEVGLGMLWNGS 231
           F   L+ +    NST+      AY  L+K+ P +  FNS        + +V + + W+G 
Sbjct: 191 FAATLQYMHKDPNSTNPGDYQAAYEVLKKVRPYITQFNSSGYINDLANNDVCVVVGWSGD 250

Query: 232 AAAAQ------KEGLPIKLVFPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAEQ 285
              A+      K    IK    KEGG+ W D   +   A + +AA K I+F+   +    
Sbjct: 251 VGIARRRTQEAKRSYEIKFSNVKEGGLLWFDVMVVPKDAPHPEAAMKWINFISDAKNNAG 310

Query: 286 ISRDTGYLTGVKASNDKFQDVAP-------LFPSQEDLDRVEWQSAVGDKTVKYE-EYFM 337
           I+ +  Y T  +A+    Q V P       ++P+ + + R+     +  + ++ E   + 
Sbjct: 311 ITNEVFYPTANRAAR---QFVTPAVAQDQTVYPADDVIARMTLMKPMPTEILRLENRLWA 367

Query: 338 KLKAG 342
           +LK G
Sbjct: 368 QLKTG 372