Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 369 a.a., polyamine ABC transporter substrate-binding protein from Magnetospirillum magneticum AMB-1

 Score =  184 bits (468), Expect = 2e-51
 Identities = 119/326 (36%), Positives = 177/326 (54%), Gaps = 23/326 (7%)

Query: 12  ACALSLLSGTAAAEDKELVFMNWGPYINSGILEQFTKETGIKVIYSTYESNETLYAKLKT 71
           A A+S +SG  AAEDK L   NW  YI    LE+FT  TGIKV Y  Y+SNE L AKL+ 
Sbjct: 14  AAAVSSVSGAQAAEDKVLNVYNWSDYIAPDTLEKFTALTGIKVNYDVYDSNEVLQAKLQA 73

Query: 72  HNQGYDLVVPS-TYFVAKMRDEGMLQKIDKSKLSNFKNLDSNY---LDKPYDPNNDYSIP 127
              GYD+V PS + F+A     G+ +K+D+SKLSN+ NLD+     L++  DP N Y+IP
Sbjct: 74  GKSGYDVVFPSASPFLANQIKAGIYRKLDRSKLSNYGNLDAQVMVTLNRAADPGNLYAIP 133

Query: 128 HVVAITGLAVNTDMY----DPNDFQSWGDLWKP----ELKG-QLMLMDDTREVFHIALRK 178
           + ++ TG A N D            SW  L+ P    +LKG  + L+D   EVF  AL  
Sbjct: 134 YAISPTGFAYNVDKVAKAGKDMPLDSWAALFDPAQVAKLKGCGVSLLDAPTEVFPAALTY 193

Query: 179 LGYSGNSTDDKQIDEAYAELQKLMPNVLVFNSDNPAAPYLSGEVGLG------MLWNGSA 232
           LG +G S D   +  A   + K+ P++  F+S        +G++ +       ++ + + 
Sbjct: 194 LGKNGASLDSADLKAAAEAVTKVRPSIKYFHSSKFINDLANGDICMAHGYVGDLVQSRNR 253

Query: 233 AAAQKEGLPIKLVFPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAEQISRDTGY 292
           AA   +G+ IK+V PKEG +  +D+  I + A + + AHK IDF+++ E+A   S  TGY
Sbjct: 254 AAEAGKGVNIKIVIPKEGAVINIDSMVIPADAPHPENAHKFIDFMMKQEVAAGFSNTTGY 313

Query: 293 LTGVKASND----KFQDVAPLFPSQE 314
              +  S      + Q+   +FPS++
Sbjct: 314 GNPIPGSRSLIRKEIQEDPVIFPSEQ 339