Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 370 a.a., Spermidine/putrescine-binding periplasmic protein from Enterobacter asburiae PDN3

 Score =  182 bits (461), Expect = 2e-50
 Identities = 117/317 (36%), Positives = 168/317 (52%), Gaps = 21/317 (6%)

Query: 2   KKLATLLAGSACALSLLSGTAAAEDKELVFMNWGPYINSGILEQFTKETGIKVIYSTYES 61
           K L+ L+AG+  A+S  +GT AAE K L   NW  YI    +  F KETGIKV+Y  ++S
Sbjct: 7   KWLSGLVAGALMAVS--AGTLAAEQKTLHVYNWSDYIAPDTVANFEKETGIKVVYDVFDS 64

Query: 62  NETLYAKLKTHNQGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLDSNYLD--KPYD 119
           NE L  KL   + G+DLVVPS  F+ +    G+ Q +DKSKL N+KNLD   L     +D
Sbjct: 65  NEVLEGKLMAGSTGFDLVVPSASFLERQLTAGVFQPLDKSKLPNWKNLDPEVLKLVAKHD 124

Query: 120 PNNDYSIPHVVAITGLAVNTD----MYDPN-DFQSWGDLWKPELKGQL-----MLMDDTR 169
           P+N Y++P++ A TG+  N D    +  P+    SW  + KPE   +L       +D   
Sbjct: 125 PDNKYAMPYLWATTGIGYNVDKVKAVLGPDVKLDSWDVVLKPENLEKLKSCGVSFLDAPE 184

Query: 170 EVFHIALRKLGYSGNSTD-DKQIDEAYAELQKLMPNVLVFNSDNPAAPYLSGEVGLGMLW 228
           E+F   L  LG   NS+  D     A   L KL PN+  F+S        +G++ + + W
Sbjct: 185 EIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAIGW 244

Query: 229 NG------SAAAAQKEGLPIKLVFPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEI 282
            G      + A   K G+ +    PKEG + + D FA+ + AKN D A++ +++L+RPE+
Sbjct: 245 AGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRPEV 304

Query: 283 AEQISRDTGYLTGVKAS 299
              IS    Y  G KAS
Sbjct: 305 IAHISDHVYYANGNKAS 321