Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., Spermidine/putrescine-binding periplasmic protein from Enterobacter asburiae PDN3

 Score =  412 bits (1060), Expect = e-120
 Identities = 205/344 (59%), Positives = 256/344 (74%), Gaps = 16/344 (4%)

Query: 11  SACALSLLSGTAAAED-KELVFMNWGPYINSGILEQFTKETGIKVIYSTYESNETLYAKL 69
           +A AL L  G A A+D K L F NW  Y+  G+LEQFTKETGIKVIYSTYESNET+YAKL
Sbjct: 6   AAAALVLGMGAAHADDSKTLYFYNWTEYVPPGLLEQFTKETGIKVIYSTYESNETMYAKL 65

Query: 70  KTHNQG-YDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLDSNYLDKPYDPNNDYSIPH 128
           KT+  G YDLVVPSTYFV KMR EGM+QKIDK+KL++F NLD   L+KP+DPNNDYSIP+
Sbjct: 66  KTYKDGAYDLVVPSTYFVDKMRKEGMIQKIDKTKLTHFSNLDPEMLNKPFDPNNDYSIPY 125

Query: 129 VVAITGLAVNTDMYDPNDFQSWGDLWKPELKGQLMLMDDTREVFHIALRKLGYSGNSTDD 188
           +   T + VN++  DP    SW DLWKPE KG L+L DD REVF +ALRKLGYSGN+TD 
Sbjct: 126 IWGATAIGVNSEAVDPKTVTSWADLWKPEYKGSLLLTDDAREVFQVALRKLGYSGNTTDP 185

Query: 189 KQIDEAYAELQKLMPNVLVFNSDNPAAPYLSGEVGLGMLWNGSAAAAQKEGLPIKLVFPK 248
           K+I+ AYAEL+KLMPNV  FNSDNPA PY+ GEV LGM+WNGSA  A++ G P+++V+PK
Sbjct: 186 KEIEAAYAELKKLMPNVAAFNSDNPANPYMEGEVNLGMVWNGSAYVARQAGTPLEVVWPK 245

Query: 249 EGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAEQISRDTGY---------LTGVKAS 299
           EGGI W+D+ AI + AKNV+ AHK+I+FLLRP++A+Q++   GY         L   + +
Sbjct: 246 EGGIFWMDSLAIPANAKNVEGAHKLINFLLRPDVAKQVAETIGYPTPNLAARRLLKPEVA 305

Query: 300 NDKFQDVAPLFPSQEDLDRVEWQSAVGDKTVKYEEYFMKLKAGQ 343
           NDK      L+P  E + + EWQ+ VGD +  YEEY+ KLKAG+
Sbjct: 306 NDK-----SLYPDAETISKGEWQNDVGDASRLYEEYYQKLKAGR 344