Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 369 a.a., spermidine/putrescine ABC transporter substrate-binding protein PotF from Dickeya dadantii 3937

 Score =  171 bits (432), Expect = 4e-47
 Identities = 108/310 (34%), Positives = 164/310 (52%), Gaps = 22/310 (7%)

Query: 2   KKLATLLAGSACALSLLSGTAAAEDKELVFMNWGPYINSGILEQFTKETGIKVIYSTYES 61
           K L+ +L G   A S+   TA+AE+K L   NW  YI    LE F KE+GIKV+Y  ++S
Sbjct: 7   KWLSGVLTGLMMAASV---TASAEEKTLHVYNWSDYIAPDTLENFQKESGIKVVYDVFDS 63

Query: 62  NETLYAKLKTHNQGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLDSNY--LDKPYD 119
           NE L  KL   + G+DLVVPS  F+ +    G+ Q +DKSKL N+KNLD     L + +D
Sbjct: 64  NEVLEGKLMAGSTGFDLVVPSASFLGRQISAGVFQPLDKSKLPNYKNLDPELMKLIEEHD 123

Query: 120 PNNDYSIPHVVAITGLAVNTD-----MYDPNDFQSWGDLWKPELKGQL-----MLMDDTR 169
           P + Y++P++ A TG+  N D     +       SW  + KPE   +L       +D   
Sbjct: 124 PGHKYAVPYLWATTGIGYNVDKVKAVLGKDAPVNSWDLVLKPENLEKLKSCGVSFLDAPA 183

Query: 170 EVFHIALRKLGYSGNSTDDKQ-IDEAYAELQKLMPNVLVFNSDNPAAPYLSGEVGLGMLW 228
           E++   L   G + NST++     +A   L KL P+V  F+S        +G++ + + W
Sbjct: 184 EIYATVLNYQGKNPNSTNEADYTKDATDLLLKLRPSVRYFHSSQYINDLANGDICVAIGW 243

Query: 229 NG------SAAAAQKEGLPIKLVFPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEI 282
            G      + A   K G+ I    PKEG + + D FAI   AKN+D+A++ +++LL+P++
Sbjct: 244 AGDVMQAANRAKEAKNGVNISYSIPKEGALAFFDVFAIPKDAKNLDSAYQFLNYLLKPDV 303

Query: 283 AEQISRDTGY 292
              +S    Y
Sbjct: 304 IANVSNHVYY 313