Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 365 a.a., ABC transporter, substrate binding protein (putrescine) from Agrobacterium fabrum C58

 Score =  182 bits (461), Expect = 2e-50
 Identities = 107/312 (34%), Positives = 165/312 (52%), Gaps = 17/312 (5%)

Query: 1   MKKLATLLAGSACALSLLSGTAAAEDKELVFMNWGPYINSGILEQFTKETGIKVIYSTYE 60
           MK  +  L  +     + +G+A A++K +   NW  YI+  ILE FTKETGIKV+Y  Y+
Sbjct: 1   MKNRSLRLTLALTTALVAAGSAMAQEKVVHVYNWSDYIDPVILEDFTKETGIKVVYDVYD 60

Query: 61  SNETLYAKLKTHNQGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLDSNYLDK--PY 118
            NE L  KL   + GYD+V P++ F+A+    G+ QK+DKSKL N KN   +  ++   Y
Sbjct: 61  GNEVLETKLLAGSSGYDVVAPTSPFLARQIKAGVYQKLDKSKLPNLKNAWPDITERLAKY 120

Query: 119 DPNNDYSIPHVVAITGLAVNTDMYDPN----DFQSWGDLWKPELKGQLM-----LMDDTR 169
           DP N+Y++ ++   TG+  N              SW  L+KPE   +L      ++D + 
Sbjct: 121 DPGNEYAVNYMWGTTGIGYNVAKVKAALGDVPVDSWDVLFKPENAEKLKSCGINILDASD 180

Query: 170 EVFHIALRKLGYSGNSTDDKQIDEAYAELQKLMPNVLVFNSDNPAAPYLSGEVGLGMLWN 229
           E F IA+  LG + +S +   ++       K+ P V  FNS        +G+  + + W+
Sbjct: 181 ETFAIAMNYLGKNPDSKETADLEAGGEVYSKIRPYVKTFNSSPYINDLANGDTCISIGWS 240

Query: 230 GSAAAAQ------KEGLPIKLVFPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIA 283
           G    A+      K G+ +  V PKEG   W+D+FAI + AKNVD AH  I+++++PE+A
Sbjct: 241 GDILQAKTRAEEAKNGVEVNYVIPKEGTYIWMDSFAIPADAKNVDEAHAFINYMMKPEVA 300

Query: 284 EQISRDTGYLTG 295
            + S    Y  G
Sbjct: 301 AKASDYVQYANG 312