Pairwise Alignments

Query, 345 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 364 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  186 bits (471), Expect = 1e-51
 Identities = 105/316 (33%), Positives = 177/316 (56%), Gaps = 19/316 (6%)

Query: 20  AMAKDQELYFYNWSEYIPSEVLEDFTKETGIKVIYSTYESNESMYAKLKTQGAGYDLVVP 79
           A A D+ L+ YNWS+YI  + + +F KE+GIKV+Y  ++SNE++ AKL    +GYD+VVP
Sbjct: 21  AQADDKVLHVYNWSDYIAPDTIANFEKESGIKVVYDVFDSNETLEAKLLAGKSGYDIVVP 80

Query: 80  STYFVSKMRKEGMLQEIDHSKLSHFKDLDPNYLN--KPFDPGNKFSIPYIWGATGIGINT 137
           S  F++K  K G+ QE+D SKLS++ +L+ + L      DP NK + PY+WG+ GIG N 
Sbjct: 81  SNNFLAKQIKAGVYQELDKSKLSNYDNLNKSLLKAVSVSDPDNKHAFPYMWGSIGIGYNP 140

Query: 138 DMLDKKSLKNWGDLWDA----------KWAGQLMLMDDAREVFHIALSKLGYSPNTTNPK 187
           + +      +  D WD           K  G +  +D   E+  +AL  LG   +T    
Sbjct: 141 EKVKAALGVDKIDSWDVLLKPENIAKLKSCG-VSFLDSPTEMLPVALHYLGLPTDTQKKA 199

Query: 188 EIKAAYRELKKLMPNVLVFNSDFPANPYLAGEVSLGMLWNGSAYMAR----QEGAPIQII 243
           ++K A     K+ P++  F+S    +    G + + + ++G    A+    + G  +++ 
Sbjct: 200 DLKQAEDLFLKIRPSIGYFHSSKYISDLANGNICVAVGYSGDIEQAKSRAAEAGGKVKVA 259

Query: 244 W--PEKGTIFWMDSISIPAGAKNIEAAHKMIDFLLRPENAAKIALEIGYPTPVKTAHDLL 301
           +  P++G   + D ++IP  A+N++AA+K +++LL+P+  A+I   + +P   + A  L+
Sbjct: 260 YDIPKEGAGSFFDMVAIPKDAENVDAAYKFMNYLLKPQVMAEITNSVHFPNGNEKATALV 319

Query: 302 PKEFANDPSIYPPQSV 317
            KE  +DP IYPP  V
Sbjct: 320 DKEITSDPGIYPPADV 335