Pairwise Alignments

Query, 345 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  424 bits (1089), Expect = e-123
 Identities = 206/338 (60%), Positives = 260/338 (76%), Gaps = 4/338 (1%)

Query: 5   LFASALCAAALFTTNAMAKDQELYFYNWSEYIPSEVLEDFTKETGIKVIYSTYESNESMY 64
           L A + CA +L +  A A+D+EL F NW  YI S +LE FTKETGIKVIYSTYESNE++Y
Sbjct: 7   LLAGSACALSLLSGTAAAEDKELVFMNWGPYINSGILEQFTKETGIKVIYSTYESNETLY 66

Query: 65  AKLKTQGAGYDLVVPSTYFVSKMRKEGMLQEIDHSKLSHFKDLDPNYLNKPFDPGNKFSI 124
           AKLKT   GYDLVVPSTYFV+KMR EGMLQ+ID SKLS+FK+LD NYL+KP+DP N +SI
Sbjct: 67  AKLKTHNQGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLDSNYLDKPYDPNNDYSI 126

Query: 125 PYIWGATGIGINTDMLDKKSLKNWGDLWDAKWAGQLMLMDDAREVFHIALSKLGYSPNTT 184
           P++   TG+ +NTDM D    ++WGDLW  +  GQLMLMDD REVFHIAL KLGYS N+T
Sbjct: 127 PHVVAITGLAVNTDMYDPNDFQSWGDLWKPELKGQLMLMDDTREVFHIALRKLGYSGNST 186

Query: 185 NPKEIKAAYRELKKLMPNVLVFNSDFPANPYLAGEVSLGMLWNGSAYMARQEGAPIQIIW 244
           + K+I  AY EL+KLMPNVLVFNSD PA PYL+GEV LGMLWNGSA  A++EG PI++++
Sbjct: 187 DDKQIDEAYAELQKLMPNVLVFNSDNPAAPYLSGEVGLGMLWNGSAAAAQKEGLPIKLVF 246

Query: 245 PEKGTIFWMDSISIPAGAKNIEAAHKMIDFLLRPENAAKIALEIGYPTPVKTAHDLLPKE 304
           P++G I W+D+ +I +GAKN++AAHKMIDFLLRPE A +I+ + GY T VK ++D    +
Sbjct: 247 PKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAEQISRDTGYLTGVKASND----K 302

Query: 305 FANDPSIYPPQSVIDNGEWQDEVGEASVLYDEYFQKLK 342
           F +   ++P Q  +D  EWQ  VG+ +V Y+EYF KLK
Sbjct: 303 FQDVAPLFPSQEDLDRVEWQSAVGDKTVKYEEYFMKLK 340