Pairwise Alignments

Query, 345 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 369 a.a., polyamine ABC transporter substrate-binding protein from Magnetospirillum magneticum AMB-1

 Score =  189 bits (479), Expect = 1e-52
 Identities = 118/332 (35%), Positives = 183/332 (55%), Gaps = 21/332 (6%)

Query: 7   ASALCAAALFTTNAM--AKDQELYFYNWSEYIPSEVLEDFTKETGIKVIYSTYESNESMY 64
           A +L AAA+ + +    A+D+ L  YNWS+YI  + LE FT  TGIKV Y  Y+SNE + 
Sbjct: 9   AVSLIAAAVSSVSGAQAAEDKVLNVYNWSDYIAPDTLEKFTALTGIKVNYDVYDSNEVLQ 68

Query: 65  AKLKTQGAGYDLVVPS-TYFVSKMRKEGMLQEIDHSKLSHFKDLDPNY---LNKPFDPGN 120
           AKL+   +GYD+V PS + F++   K G+ +++D SKLS++ +LD      LN+  DPGN
Sbjct: 69  AKLQAGKSGYDVVFPSASPFLANQIKAGIYRKLDRSKLSNYGNLDAQVMVTLNRAADPGN 128

Query: 121 KFSIPYIWGATGIGINTDMLDKKS----LKNWGDLWDAKWAGQL-----MLMDDAREVFH 171
            ++IPY    TG   N D + K      L +W  L+D     +L      L+D   EVF 
Sbjct: 129 LYAIPYAISPTGFAYNVDKVAKAGKDMPLDSWAALFDPAQVAKLKGCGVSLLDAPTEVFP 188

Query: 172 IALSKLGYSPNTTNPKEIKAAYRELKKLMPNVLVFNSDFPANPYLAGEVSLGMLWNGSAY 231
            AL+ LG +  + +  ++KAA   + K+ P++  F+S    N    G++ +   + G   
Sbjct: 189 AALTYLGKNGASLDSADLKAAAEAVTKVRPSIKYFHSSKFINDLANGDICMAHGYVGDLV 248

Query: 232 MARQ------EGAPIQIIWPEKGTIFWMDSISIPAGAKNIEAAHKMIDFLLRPENAAKIA 285
            +R       +G  I+I+ P++G +  +DS+ IPA A + E AHK IDF+++ E AA  +
Sbjct: 249 QSRNRAAEAGKGVNIKIVIPKEGAVINIDSMVIPADAPHPENAHKFIDFMMKQEVAAGFS 308

Query: 286 LEIGYPTPVKTAHDLLPKEFANDPSIYPPQSV 317
              GY  P+  +  L+ KE   DP I+P + V
Sbjct: 309 NTTGYGNPIPGSRSLIRKEIQEDPVIFPSEQV 340