Pairwise Alignments

Query, 345 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 348 a.a., ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  450 bits (1158), Expect = e-131
 Identities = 214/333 (64%), Positives = 265/333 (79%), Gaps = 2/333 (0%)

Query: 12  AAALFTTNAMAKDQE-LYFYNWSEYIPSEVLEDFTKETGIKVIYSTYESNESMYAKLKTQ 70
           A AL  + A A D + LYFYNW+EY+P  +LE FTKETGIKVIYSTYESNE+MYAKLKT 
Sbjct: 13  ALALGMSAAHASDNDTLYFYNWTEYVPPGLLEQFTKETGIKVIYSTYESNETMYAKLKTY 72

Query: 71  GAG-YDLVVPSTYFVSKMRKEGMLQEIDHSKLSHFKDLDPNYLNKPFDPGNKFSIPYIWG 129
             G YDLVVPSTY+V KMRKEGM+Q+ID SKL++F +LDP  LNKPFDP N +S+PYIWG
Sbjct: 73  KDGAYDLVVPSTYYVDKMRKEGMIQKIDKSKLTNFHNLDPEMLNKPFDPNNDYSVPYIWG 132

Query: 130 ATGIGINTDMLDKKSLKNWGDLWDAKWAGQLMLMDDAREVFHIALSKLGYSPNTTNPKEI 189
           AT IG+N+D +D K++ +W DLW  ++   L+L DDAREVF +AL KLGYS NTT+PKEI
Sbjct: 133 ATAIGVNSDAIDPKTITSWADLWKPEYKNSLLLTDDAREVFQMALRKLGYSGNTTDPKEI 192

Query: 190 KAAYRELKKLMPNVLVFNSDFPANPYLAGEVSLGMLWNGSAYMARQEGAPIQIIWPEKGT 249
           +AAY ELKKLMPNV  FNSD PANPY+ GEV+LGM+WNGSA++ARQ G P++++WP++G 
Sbjct: 193 EAAYEELKKLMPNVAAFNSDNPANPYMEGEVNLGMVWNGSAFVARQAGTPLEVVWPKEGG 252

Query: 250 IFWMDSISIPAGAKNIEAAHKMIDFLLRPENAAKIALEIGYPTPVKTAHDLLPKEFANDP 309
           IFWMDS++IPA AKN E A K+I+FLLRP+ A ++A  IGYPTP   A  LL  E AND 
Sbjct: 253 IFWMDSLAIPANAKNKEGALKLINFLLRPDVAKEVAETIGYPTPNLAARKLLSPEVANDK 312

Query: 310 SIYPPQSVIDNGEWQDEVGEASVLYDEYFQKLK 342
           S+YP    I  GEWQ++VG+AS +Y+EY+QKLK
Sbjct: 313 SLYPDAQTISKGEWQNDVGDASAIYEEYYQKLK 345