Pairwise Alignments

Query, 345 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., Spermidine/putrescine-binding periplasmic protein from Enterobacter asburiae PDN3

 Score =  461 bits (1185), Expect = e-134
 Identities = 223/344 (64%), Positives = 272/344 (79%), Gaps = 5/344 (1%)

Query: 1   MKNKLFASALCAAALFTTNAMAKDQE-LYFYNWSEYIPSEVLEDFTKETGIKVIYSTYES 59
           MK  L A+AL    L    A A D + LYFYNW+EY+P  +LE FTKETGIKVIYSTYES
Sbjct: 1   MKKMLAAAAL---VLGMGAAHADDSKTLYFYNWTEYVPPGLLEQFTKETGIKVIYSTYES 57

Query: 60  NESMYAKLKTQGAG-YDLVVPSTYFVSKMRKEGMLQEIDHSKLSHFKDLDPNYLNKPFDP 118
           NE+MYAKLKT   G YDLVVPSTYFV KMRKEGM+Q+ID +KL+HF +LDP  LNKPFDP
Sbjct: 58  NETMYAKLKTYKDGAYDLVVPSTYFVDKMRKEGMIQKIDKTKLTHFSNLDPEMLNKPFDP 117

Query: 119 GNKFSIPYIWGATGIGINTDMLDKKSLKNWGDLWDAKWAGQLMLMDDAREVFHIALSKLG 178
            N +SIPYIWGAT IG+N++ +D K++ +W DLW  ++ G L+L DDAREVF +AL KLG
Sbjct: 118 NNDYSIPYIWGATAIGVNSEAVDPKTVTSWADLWKPEYKGSLLLTDDAREVFQVALRKLG 177

Query: 179 YSPNTTNPKEIKAAYRELKKLMPNVLVFNSDFPANPYLAGEVSLGMLWNGSAYMARQEGA 238
           YS NTT+PKEI+AAY ELKKLMPNV  FNSD PANPY+ GEV+LGM+WNGSAY+ARQ G 
Sbjct: 178 YSGNTTDPKEIEAAYAELKKLMPNVAAFNSDNPANPYMEGEVNLGMVWNGSAYVARQAGT 237

Query: 239 PIQIIWPEKGTIFWMDSISIPAGAKNIEAAHKMIDFLLRPENAAKIALEIGYPTPVKTAH 298
           P++++WP++G IFWMDS++IPA AKN+E AHK+I+FLLRP+ A ++A  IGYPTP   A 
Sbjct: 238 PLEVVWPKEGGIFWMDSLAIPANAKNVEGAHKLINFLLRPDVAKQVAETIGYPTPNLAAR 297

Query: 299 DLLPKEFANDPSIYPPQSVIDNGEWQDEVGEASVLYDEYFQKLK 342
            LL  E AND S+YP    I  GEWQ++VG+AS LY+EY+QKLK
Sbjct: 298 RLLKPEVANDKSLYPDAETISKGEWQNDVGDASRLYEEYYQKLK 341