Pairwise Alignments

Query, 345 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 369 a.a., spermidine/putrescine ABC transporter substrate-binding protein PotF from Dickeya dianthicola ME23

 Score =  192 bits (488), Expect = 1e-53
 Identities = 107/320 (33%), Positives = 177/320 (55%), Gaps = 19/320 (5%)

Query: 17  TTNAMAKDQELYFYNWSEYIPSEVLEDFTKETGIKVIYSTYESNESMYAKLKTQGAGYDL 76
           +  A A+++ L+ YNWS+YI  + LE+F KE+GI V+Y  ++SNE +  KL     G+DL
Sbjct: 21  SVTASAEEKTLHVYNWSDYIAPDTLENFQKESGINVVYDVFDSNEVLEGKLMAGSTGFDL 80

Query: 77  VVPSTYFVSKMRKEGMLQEIDHSKLSHFKDLDPNYLN--KPFDPGNKFSIPYIWGATGIG 134
           VVPS  F+ +    G+ Q +D SKL ++K+LDP  +   +  DPG+K+++PY+W  TGIG
Sbjct: 81  VVPSASFLGRQISAGVFQPLDKSKLPNYKNLDPELMKLIEEHDPGHKYAVPYLWATTGIG 140

Query: 135 INTD----MLDKKSLKNWGDL------WDAKWAGQLMLMDDAREVFHIALSKLGYSPNTT 184
            N D    +L K +  N  DL       +   +  +  +D   E++   L+  G +PN+ 
Sbjct: 141 YNVDKVKAILGKDAPVNSWDLVLKPENLEKLKSCGVAFLDAPAEIYATVLNYQGKNPNSA 200

Query: 185 NPKE-IKAAYRELKKLMPNVLVFNSDFPANPYLAGEVSLGMLWNGSAYMA------RQEG 237
           N  +  K A   L KL P+V  F+S    N    G++ + + W G    A       + G
Sbjct: 201 NESDYTKDATDLLLKLRPSVRYFHSSQYINDLANGDICVAIGWAGDVMQAANRAKDAKNG 260

Query: 238 APIQIIWPEKGTIFWMDSISIPAGAKNIEAAHKMIDFLLRPENAAKIALEIGYPTPVKTA 297
             I    P++G + + D  +IP  AKN+++A++ +++LL+P+  A ++  + Y  P K A
Sbjct: 261 VNISYSIPKEGALAFFDVFAIPKDAKNLDSAYQFLNYLLKPDVIANVSNHVYYANPNKEA 320

Query: 298 HDLLPKEFANDPSIYPPQSV 317
             L+ +E  N+P+IYPP  +
Sbjct: 321 TALVKEEVRNNPNIYPPADI 340