Pairwise Alignments

Query, 458 a.a., sodium:alanine symporter family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 471 a.a., Amino-acid carrier protein AlsT from Xanthobacter sp. DMC5

 Score =  289 bits (739), Expect = 2e-82
 Identities = 173/450 (38%), Positives = 257/450 (57%), Gaps = 13/450 (2%)

Query: 4   LQSFLQTVDSLVWGPPLLILLVGTGVYFTFRLGLLQFRRLPTALAMVFGREKSSDKQGDV 63
           + + +  ++++ WG  L+  L+  GVYFT RLG +Q    P  L  V  R   +DK G +
Sbjct: 1   MDAVIDFLNTIFWGYVLIYGLLAVGVYFTLRLGFVQIVHFPEMLRSVL-RSNDTDKSG-I 58

Query: 64  SSFAALCTALSATIGTGNIVGVATAIKLGGPGALFWMWLAALFGMATKYAECLLAVKYRQ 123
           + F ALCT+L++ +GTGNI GVA A+ LGGPGA+FWMW+ A  GMAT +AE  LA  Y+ 
Sbjct: 59  TPFQALCTSLASRVGTGNIAGVAVALTLGGPGAIFWMWVVAALGMATAFAESTLAQLYKV 118

Query: 124 IDDKGQMVGGPMYYLRDGVSSKTLAVLFAVFAVGVACFG-IGTFPQVNAILDATQISFGV 182
            DD+G+  GGP +Y+  G+ +     LF+V    +  FG +    Q N+I DA + +FGV
Sbjct: 119 KDDEGRYRGGPAFYIAHGLKASWAGGLFSVCL--IISFGLVFNAVQANSIADAVEGAFGV 176

Query: 183 PREASAVVLTVLVAIVTIGGIQSIAKVAGKVVPAMALFYIIACLSVIVTNADKLADAVEL 242
           P+  + +V+ VL  ++  GGI +IA+ A  VVP MAL Y+      + T+   +   +  
Sbjct: 177 PKLGTGLVVAVLSGVIIFGGIATIARTAEFVVPFMALAYVGLAFYALATHIALVPSVLGH 236

Query: 243 VLVSAFTSTAATGGFLGASIMLAIQSGIARGVFSNESGLGSAPMAAAAAKTD--SCVEQG 300
           ++ SAF   AA GG  G S+  A+ +G+ RG+FSNE+G+GSAP  AA A  D    V QG
Sbjct: 237 IVGSAFGVGAAAGGVAG-SVAAAMMNGVKRGLFSNEAGMGSAPNIAAVATPDPHHPVSQG 295

Query: 301 LISMTGTFFDTIIICTMTGLALILTGAWQS-DLSGAAMTTYAFATGLNAQTIGPMLVSIG 359
            +   G F DTI+ICT T L ++L+    S +L+G  +T  A    ++   +G   V+I 
Sbjct: 296 FVQSLGVFIDTIVICTATALLILLSEVVPSAELTGTQLTQAALE--VHVGWLGRYFVAIA 353

Query: 360 LMFFAFTTILGWNYYGERCMVFL--FGTKAVLPYKIVFIGLIASGAFLHLDLIWIIADIV 417
           + FFAFT+I+G   Y E  +VFL       V+  ++  + ++  G+   +  ++  AD  
Sbjct: 354 IFFFAFTSIIGNYSYAENALVFLGHGHVSGVIVLRLALLAMVVWGSLQSVATVFNAADAS 413

Query: 418 NGLMAIPNLIGLVALRHVVVEETKQYFAAR 447
            GLMA  NL+ +V L   VV  TK Y A R
Sbjct: 414 MGLMASINLVAIVLLSGTVVRLTKDYLAQR 443