Pairwise Alignments

Query, 458 a.a., sodium:alanine symporter family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 468 a.a., Amino-acid carrier protein AlsT from Alteromonas macleodii MIT1002

 Score =  282 bits (721), Expect = 2e-80
 Identities = 173/470 (36%), Positives = 266/470 (56%), Gaps = 27/470 (5%)

Query: 4   LQSFLQTVDSLVWGPP--LLILLVGTGVYFTFRLGLLQFRRLPTALAMVFGREKSSDKQG 61
           +  F+  V++++WG    L+I+L+  G++FT +LG +Q R      +++ G   +S K G
Sbjct: 2   INEFVSLVNNILWGDGQVLIIMLLACGIWFTVKLGGVQLRHFGHMFSLLKG-SNTSTKDG 60

Query: 62  DVSSFAALCTALSATIGTGNIVGVATAIKLGGPGALFWMWLAALFGMATKYAECLLAVKY 121
            +SSF ALCT+LSA +GTGN+ GVA AI LGG GA+FWMW+ AL GMAT +AE +L   Y
Sbjct: 61  -ISSFQALCTSLSARVGTGNLAGVAVAISLGGAGAIFWMWMIALLGMATGFAESVLGQLY 119

Query: 122 RQIDDKGQMVGGPMYYLRDGVSSKTLAVLFAVFAVGVACFGIG---TFPQVNAILDATQI 178
           +  D+ G+  GGP YY++ G++   LAV F++       FG G   +  Q N I DA   
Sbjct: 120 KVRDENGEFRGGPAYYIKQGLNKTWLAVAFSL----CLFFGYGFVFSAVQANTITDALNN 175

Query: 179 SFGVPREASAVVLTVLVAIVTIGGIQSIAKVAGKVVPAMALFYIIACLSVIVTNADKLAD 238
           ++  P E   + +  L A++ +GG++SIA+ A  VVP M + Y++  L++   N  +L  
Sbjct: 176 AYSFPTEYVGLAIIALAALIVVGGLKSIARFAEFVVPFMGIGYVLVALAITFINISELPA 235

Query: 239 AVELVLVSAFTSTAATGGFLGASIMLAIQSGIARGVFSNESGLGSAPMAAAAA--KTDSC 296
            +  ++ SAF    A  G LGA    AI++GI RG++SNE+G GS P AAA+A    +  
Sbjct: 236 MLLDIVKSAFGLQEAGAGALGA----AIKNGIQRGLYSNEAGSGSVPHAAASAVPNPNHP 291

Query: 297 VEQGLISMTGTFFDTIIICTMTGLALILTGAWQSD-LSGAAMTTYAFATGLNAQTIGPML 355
           V QG I M G F DT+++CT T   ++L G   SD + G  +T  A ++ L     G   
Sbjct: 292 VSQGYIQMLGVFLDTLVLCTSTAFIILLAGGSSSDQMEGIRLTQDAMSSHLGEG--GTDF 349

Query: 356 VSIGLMFFAFTTILGWNYYGERCM-VFLFGTK-AVLPYKIVFIGLIASGAFLHLDLIWII 413
           V+  +  FAFT+++    YGE  + +F    K     Y I ++G+I  GA   L  +W +
Sbjct: 350 VAAAISLFAFTSVVANYAYGESNLHMFKLDNKIGRAVYTIGYLGMIYWGAQAALPQVWAM 409

Query: 414 ADIVNGLMAIPNLIGLVALRHVVVEETKQYF-----AARYQYSEAEAQVQ 458
           AD+  GLM + N+I +V +   +V  +K YF      A  +Y   + ++Q
Sbjct: 410 ADMALGLMTVINIIAIVWMTPTIVSISKDYFKKKDSGANMEYKAGDCEIQ 459