Pairwise Alignments

Query, 212 a.a., LysE family translocator from Vibrio cholerae E7946 ATCC 55056

Subject, 216 a.a., RhtB family transporter from Agrobacterium fabrum C58

 Score =  108 bits (271), Expect = 6e-29
 Identities = 71/201 (35%), Positives = 105/201 (52%), Gaps = 6/201 (2%)

Query: 5   NFEAFFIAITILTLTPGLDTALVIRNTSRAGFADGCTTSLGICFGLFVHATFSAIGISAI 64
           N   F     +L L PG     +   +   G + G  + LGI     VH   +A+G+SA+
Sbjct: 10  NLGLFISTTLVLLLVPGPAVLYIFARSVEQGRSAGLVSILGIHTATLVHVVAAAVGLSAL 69

Query: 65  LAQSAELFQIVKMVGAAYLIWLGISSLRSLMKTGQGIEVASLAHAQFRLTRSLREGFLSN 124
           LA SA  F +VK  GAAYLIWLG   L+ L       +V      + R+ R  REGF+ N
Sbjct: 70  LASSALAFSVVKYAGAAYLIWLG---LKKLFGPSDIPDVEGGLPTRSRM-RIFREGFIVN 125

Query: 125 VLNPKTAVFYLAFLPQFINPDYSPLA-QSLLMALIHFAIAMVWQCGLAGALSSAKNLLKN 183
           +LNPKTA+F+LAFLPQF+  D   +A Q   + +++ AI ++     A    +A N LK 
Sbjct: 126 LLNPKTALFFLAFLPQFVEVDRGHVAMQIAFLGILYTAIGILTDGTYALVAGTAGNWLKR 185

Query: 184 AS-FMRWMEGTTGVVLVALGI 203
           +  +++     +G V + LG+
Sbjct: 186 SPVYLKAERWVSGFVYIGLGV 206