Pairwise Alignments

Query, 1163 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 788 a.a., VgrG protein from Variovorax sp. SCN45

 Score =  241 bits (615), Expect = 2e-67
 Identities = 202/635 (31%), Positives = 296/635 (46%), Gaps = 60/635 (9%)

Query: 13  LEDETLVVRGFHGQESLSNSVFLGQACYGFRYEVQLASRVSNLTAEQMVDKRAELKLYRN 72
           L ++ L+ R  +G E LS           F +EV L S  + +  + ++ K   L++ + 
Sbjct: 11  LAEDQLMFRSMNGTEGLSRL---------FDFEVDLLSPSAAIDLQSVLGKPLSLEI-KT 60

Query: 73  SQLVQRVHGIVRAFSQ-GDIGH--HHTFYQLTLVPALERLSLRHNSRIFQKQTVPEILSI 129
           +   + + G V  FS  G  G    HT Y+ ++ P+L  L+     RIFQ +TV E+L  
Sbjct: 61  AGAPRFLSGQVVRFSMIGREGRTSRHTVYRASVRPSLWYLTRTSGFRIFQNKTVVEMLEE 120

Query: 130 LLQEMGINDYAFALKRDGVQR--EFCVQYRESDIDFLHRLAAEEGLVYSFVHEAGKHTLY 187
           +  +    D+AF  K     R  E C QY ESD  F+ RL   EG+ Y F HE  +HTL 
Sbjct: 121 VFADY---DFAFEKKLTASYRQWEHCAQYNESDFAFVSRLMELEGIYYYFKHEQNEHTLV 177

Query: 188 FSDASDSLSKLP--EPIPYNALVGGAI-DTPYIHGLTYRTQAEVSEVQLKDYSFKKPAYS 244
            +D   +   +P  E I Y A       D   I       +       + D++F  P  S
Sbjct: 178 LADDIGAHEPMPGYETIDYFASDREVTEDIEVIDEWRVTGEVRTGRYTVDDFNFTTPG-S 236

Query: 245 FLQTVQGTELDYQQTRYQHFDAPGRYKDDVNGAAFSQIRLDYLRRHAHTATGQSNEPLLR 304
            L  V+     +    Y+ ++  G Y +   G  ++++RL+  +     + G +    + 
Sbjct: 237 DLTNVRSQPQPHDHADYEMYEWLGEYTNAGEGEHYARVRLEEAQALGERSEGHATVRGMA 296

Query: 305 AGYKFDLQEHLDPAMNRDWVVVSINHQGEQPQALQEDG---GSGATTYSNQFSLIPGHLH 361
            GYKF ++       NR++++VS+ +      AL+E G   G     Y   F   P  L 
Sbjct: 297 PGYKFTMRGSAREEDNREYLIVSVAY------ALREGGYASGVEQGEYGFGFVAQPTSLP 350

Query: 362 WRAEPQPK-PQVDGPMIATVVGPEGEEIFCDEHGRVKIHFPWDRYSNGNEQSSCWVRVSQ 420
           +RA      P+  GP  A VVGPEG+EI+ D++GRVK+ F WDR    NE  SC+VRVSQ
Sbjct: 351 YRAPRVTSVPRTSGPQTAVVVGPEGKEIWTDQYGRVKVQFRWDRSGRRNENCSCFVRVSQ 410

Query: 421 GWAGSQYGFIAIPRIGHEVIVEFLNGDPDQPIITGRTYHATNTPPYTLPEHKTKTVLRTE 480
            +AG  +G +  PRIG EVIV+F+ G  D+PIITGR Y+  + PP+ LP   TK+ L T 
Sbjct: 411 VFAGDGFGAVFTPRIGQEVIVDFIGGLADRPIITGRVYNPRHMPPFDLPGEDTKSGLVTR 470

Query: 481 THQGEG---FNELSFEDQAGKEQIYLHAQKDFDGLIEND--------HTTVIRHDHHL-- 527
           +  G      N L FED+ G E + LHA+++ +  +E D         TTVI     L  
Sbjct: 471 STPGGSPATANSLVFEDRIGAEFVALHAERNLNVSVEADETHDTGGSRTTVIEGPDVLTD 530

Query: 528 ------TVENDQFTQIKHNQHLTVEWESREAVTGEQVLSIEGSLHVKTGKVWVNE----- 576
                 TV      ++   Q +T+     + V G Q  +I G    +   V  NE     
Sbjct: 531 NTLRDATVNGPDTLEVNGPQTITINGPQTQTVNGLQTETINGP---RVDTVTANEIRTVV 587

Query: 577 AGTEIHVKAGQKVVIEAGSEITVKAGGSFVKVDPA 611
           AG    V A + VVI      TV  G S V VD A
Sbjct: 588 AGRLDTVTAYETVVINGVRSETVH-GPSTVTVDDA 621