Pairwise Alignments

Query, 1163 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 791 a.a., VgrG protein from Variovorax sp. SCN45

 Score =  234 bits (598), Expect = 2e-65
 Identities = 168/547 (30%), Positives = 258/547 (47%), Gaps = 77/547 (14%)

Query: 83  VRAFSQGDIGHHHTFYQLTLVPALERLSLRHNSRIFQKQTVPEILSILLQEMGINDYAFA 142
           VR    G +G H+  Y++TL      L+ R NSRI Q++ V E+L  + ++  I  +   
Sbjct: 79  VRFVRAGHVGRHYE-YRITLRSWFWLLTKRTNSRILQEKKVLEVLDAVFEDSPIKRFK-K 136

Query: 143 LKRDGV-----QREFCVQYRESDIDFLHRLAAEEGLVYSFVHEAGKHTLYFSDASD-SLS 196
            + D V      R +CVQ++ESD  FL RL  +EG+ Y F       T++ SDASD +  
Sbjct: 137 TRADNVIGTHNPRRYCVQHQESDYGFLSRLLEDEGIYYWFDAHGAPGTMHLSDASDIAHE 196

Query: 197 KLPEPIPYNALVGGAIDTPY------IHGLTYRTQAEVSEVQLKDYSFKKPAYSFLQTVQ 250
           KLP     + +   A +  +      + G  + T    S    +D  FK      ++   
Sbjct: 197 KLPANDTLHHMATDASEARFNEVSRWVSGRQFGTGKHAS----RDSDFKA-----IKKKL 247

Query: 251 GTELD----YQQTRYQHFDAPGRYKDDVNGAAFSQIRLDYLRRHAHTATGQSNEPLLRAG 306
           G + D    ++    + F+ PG Y     G + +++R D LR         +  P + AG
Sbjct: 248 GADADASGEHELASLEMFEFPGGYFTGDEGESRAKLRGDELRARRDRHWALTPWPDVAAG 307

Query: 307 YKFDLQEHLDPAMNRDWVVVSI----NHQGEQ-----------------PQALQEDGGSG 345
             F  +   D   N ++++ +     +H+G +                  + L++D  + 
Sbjct: 308 RGFKFEGDPDGTRNGEYIIAACTFVASHRGYEGVSASAASAARPVQAALAEVLRDDAVNA 367

Query: 346 AT--------------------TYSNQFSLIPGHLHWRAEP-QPKPQVDGPMIATVVGPE 384
            T                    T +   +++P    +RA    P+  + GP  A VVGP+
Sbjct: 368 DTLQVLEDLIAATPALAAGQPGTSAFLLTVMPADRPFRAPRLTPRVTMPGPQTAIVVGPK 427

Query: 385 GEEIFCDEHGRVKIHFPWDRYSNGNEQSSCWVRVSQGWAGSQYGFIAIPRIGHEVIVEFL 444
           G+E+  D+HGRVK+HF WDRY   +E+S+CWVRVSQ WAG  +G    PRIG EVIV+FL
Sbjct: 428 GDELHVDDHGRVKVHFHWDRYDESDEKSTCWVRVSQPWAGKGWGGYFAPRIGQEVIVDFL 487

Query: 445 NGDPDQPIITGRTYHATNTPPYTLPEHKTKTVLRTETHQGEGFNELSFEDQAGKEQIYLH 504
           NGDPD+PII GR Y+     P+            T       FNE  FED  GKEQ+YLH
Sbjct: 488 NGDPDRPIIMGRVYNDDQPIPFKSHTQSGFRTRSTPKGNAANFNEFRFEDDKGKEQVYLH 547

Query: 505 AQKDFDGLIENDHTTVIRHDHHLTVENDQFTQIKHNQHLTVEWESREAVTGEQVLSIEGS 564
           A+++ D  +E D T  + HD   TV +D+  +IK+++         E VTG + ++I G 
Sbjct: 548 AERNLDVEVEADETRNVGHDRTKTVGHDEKVKIKNDR--------TEEVTGNETITIHGK 599

Query: 565 LHVKTGK 571
             +   K
Sbjct: 600 RELTVDK 606