Pairwise Alignments

Query, 1163 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 681 a.a., VgrG protein from Variovorax sp. SCN45

 Score =  264 bits (674), Expect = 2e-74
 Identities = 188/638 (29%), Positives = 304/638 (47%), Gaps = 62/638 (9%)

Query: 42  FRYEVQLAS---------RVSNLTAEQMVDKRAELKLYRNSQ-----LVQRVHGIVRAFS 87
           FRY + LA+         + +N+  +Q+V +   + +  + +       + + G+V    
Sbjct: 43  FRYTLTLATPEQSGYSGRQAANVAIKQLVGEVLTVHIRLDGRPGAGGSQRHISGLVTRVR 102

Query: 88  QGDIGHHHTFYQLTLVPALERLSLRHNSRIFQKQTVPEILSILLQEMGINDYAFAL--KR 145
              + +    Y+  + P L   +  ++ RIFQ QTV   L+IL Q +G  D+ F +   +
Sbjct: 103 FLRLENRRALYEAVIEPWLTLATRTNDFRIFQNQTV---LAILSQTLGKYDFPFEICASQ 159

Query: 146 DGVQREFCVQYRESDIDFLHRLAAEEGLVYSFVHEAGKHTLYFSDASDSLSKLP------ 199
           +   REF VQY ESD DF+ RL  E GL Y F H  G H L   D  D  +  P      
Sbjct: 160 NYPPREFQVQYGESDHDFMARLMHEWGLYYYFEHAEGAHKLVVVD--DMAAHKPFANAAY 217

Query: 200 EPIPYNALVGGAIDTPYIHGLTYRTQAEVSEVQLKDYSFKKPAYSFLQTVQGTELDYQQT 259
           E IP++A     +   +          +       D+ F +P    LQ V        Q 
Sbjct: 218 ETIPFHA-AEDTVREEHCDSFNACEALQSGRWVTSDFDFTRPKAD-LQQVSAMPRKTAQN 275

Query: 260 RYQHFDAPGRYKDDVNGAAFSQIRLDYLRRHAHTATGQSNEPLLRAGYKFDLQEHLDPAM 319
             + +  PG Y  +  G    + R++ +      A+G  N   +  G    L+ H     
Sbjct: 276 TLERYGWPGDYAVESEGEQLVRTRMEEVGSQGERASGSGNLRAVVPGCLITLERHPQSES 335

Query: 320 NRDWVVVSINHQGEQPQALQEDGGSGATTYSNQFSLIPGHLHWRAEPQ--PKPQVDGPMI 377
           NR ++V       ++P    E  G         F +I     +RA     P+P+  GP  
Sbjct: 336 NRQYLVTDARLHMQEPG---EASGQEVFECRVDFDVISSGKVFRAPAPNAPRPRTSGPQT 392

Query: 378 ATVVGPEGEEIFCDEHGRVKIHFPWDRYSNGNEQSSCWVRVSQGWAGSQYGFIAIPRIGH 437
           A V GP G EI+ D++GRVK+ F W+RY   +E SSCWVRVS  WAG+ +G I IPRIG 
Sbjct: 393 AIVTGPAGREIWTDQYGRVKLSFHWNRYCTKDENSSCWVRVSSPWAGTNFGGIQIPRIGQ 452

Query: 438 EVIVEFLNGDPDQPIITGRTYHATNTPPYTLPEHKTKTVLRTETHQG---EGFNELSFED 494
           EVIV+F NGDPD+PI+TGR Y+A N PP+TLP++ T++ L T + +G      N L FED
Sbjct: 453 EVIVDFENGDPDRPIVTGRVYNADNMPPWTLPDNATQSGLLTRSSEGATDANANALRFED 512

Query: 495 QAGKEQIYLHAQKDFDGLIENDHTTVIRHDHHLTVENDQFTQIK--------HNQHLTVE 546
           + G+EQ++LHA+++ D  +E D T  + HD   T+++D+   +K        H++ +T+ 
Sbjct: 513 KKGQEQVWLHAERNQDIEVERDETHWVGHDRSKTIDHDETVHVKHDRTETVGHDETITIG 572

Query: 547 WESREAVTGEQVLSIEGSLH-------------VKTGKVWVNE---AGTEIHVKAGQKVV 590
               E +   ++L++  +++              KT  V + +    G   +   G+   
Sbjct: 573 NNRMETIKANELLTVLQNMNRFVALTSSEEVGIAKTSLVGLTQTVAVGKSKNETIGEDFS 632

Query: 591 IEAGSEITVKAGGSFVKVDPAG-VHLSGALVNLNSGGS 627
           ++ G ++ +  G S +++   G V L+GA  +  + G+
Sbjct: 633 LDVGEKLVITVGKSRLEMTKDGQVTLTGAKFDFRATGA 670