Pairwise Alignments

Query, 1163 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 1057 a.a., VgrG protein from Variovorax sp. SCN45

 Score =  278 bits (710), Expect = 2e-78
 Identities = 209/711 (29%), Positives = 325/711 (45%), Gaps = 69/711 (9%)

Query: 16  ETLVVRGFHGQESLSNSVFLGQACYGFRYEVQLASRVSNLTAEQMVDKRAELKLYRNSQL 75
           E L  R   GQE +S           F + V+L S + N+   +M+ +   +++     L
Sbjct: 13  ERLKFRSMTGQERISAL---------FEHRVRLISDMPNIQPRRMLGEDMSIEV----NL 59

Query: 76  VQRVHGIVRAFSQGDIGHHH---------TFYQLTLVPALERLSLRHNSRIFQKQTVPEI 126
              + G  + F  G +               Y+ TL P L   + R + +IFQ +T P+I
Sbjct: 60  ATELGGAGKRFLSGQVTRFAYVGKDDGDMCVYEATLRPWLWYATRRSDFKIFQFKTAPQI 119

Query: 127 LSILLQEMGINDYAFALKRDGVQR--EFCVQYRESDIDFLHRLAAEEGLVYSFVHEAGKH 184
           L  +L   G   +A   +  G  R  ++CVQY ESD +F+ RL  +EG+ Y F H  G H
Sbjct: 120 LQEVLAPYG---FAIDARLSGNYRTWDYCVQYSESDFNFVSRLMEQEGIYYFFSHAQGSH 176

Query: 185 TLYFSDASDSLSKLPE---PIPYNA--LVGGAIDTPYIHGLTYRTQAEVSEVQLKDYSFK 239
            L   D +DS + +P     +PY+A  L    ++  +I   ++            DY F+
Sbjct: 177 QLVLCDGADSHTPVPSGPVKVPYHAGVLAAQILEQDFIDSWSHSEDIASGNFAADDYDFR 236

Query: 240 KPAYSFLQTVQGTELDYQQTRYQHFDAPGRYKDDVNGAAFSQIRLDYLRRHAHTATGQSN 299
           KP    + TV+     + +  ++ +D PG Y +  +G  ++++RL+ L       + + N
Sbjct: 237 KPNAE-IDTVRQQPAGHSRDDFEIYDWPGGYTELGDGENYARLRLEQLAGRRELVSAEGN 295

Query: 300 EPLLRAGYKFDLQEHLDPAMNRDWVVVSINHQGEQPQALQEDGGSGA--------TTYSN 351
              +  GY F+L  H +   NR +++ ++ +  ++  AL+  G + A        T+Y  
Sbjct: 296 LRHMAPGYLFELARHPNAEDNRRYLIEAVTYDFQE-NALRVAGAADAAYSESTSSTSYRQ 354

Query: 352 QFSLIPGHLHWR-AEPQPKPQVDGPMIATVVGPEGEEIFCDEHGRVKIHFPWDRYSNGNE 410
            F ++P    +R A   P+P+  GP  A VVGP GEEI  DE+GR+K+ F WDRY   +E
Sbjct: 355 TFEVLPDSAPFRPARVTPRPRTTGPQTAVVVGPAGEEIHTDEYGRIKVQFHWDRYGRRDE 414

Query: 411 QSSCWVRVSQGWAGSQYGFIAIPRIGHEVIVEFLNGDPDQPIITGRTYHATNTPPYTLPE 470
            SSCW+RVSQ WAGS YG + IPRIG EVIV+FLNGDPD PI+TG  Y+A   PP+ LP 
Sbjct: 415 NSSCWIRVSQTWAGSNYGAMHIPRIGQEVIVDFLNGDPDYPIVTGCVYNAAQMPPWELPR 474

Query: 471 HKTKTVLRTETHQGEGFNE-LSFEDQAGKEQIYLHAQKDFDGLIENDHTTVIRHDHHLTV 529
           HKT+T  +T   +G G    L FED  G E I L            DH     H  +L  
Sbjct: 475 HKTQTGFQTNWSKGGGGKHMLRFEDSRGTEHIEL----------STDHGNTHLHMGYLMN 524

Query: 530 ENDQFTQIKHNQHLTVEWESREAVTGEQVLSIEGSLHVKTGKVWVNEAGTEIHVKAGQKV 589
           +     +    +  T EW S  A  G  + +       +T +   N  G E H+ A    
Sbjct: 525 QGSGVQRSYGFELRTNEWGSIRADKGLLLTTYTQDYAQRTSR--DNPDGHE-HMGA---- 577

Query: 590 VIEAGSEITVKAGGSFVKVDPAGVHLSGALVNLNSGGSAGSGSGFGGAMPALPGGLEPAV 649
                   T+    + ++     +  + ALV   + G   +  G    + A  G  +   
Sbjct: 578 --------TLAQSNALMQASGQAIAATKALVGAMAQGKNQTLMGLVQGVQAAGGVSQAVA 629

Query: 650 ALAPPQTISYQALLQAEQANVPAVKVCPLAAQEATPAVNSITPPPPPPIAP 700
           ALA             + A   A ++  L+ +   P V+ ++P     I+P
Sbjct: 630 ALAAGGAPEAGVSDNPDPAMADAQQMLDLSRKIDKPVVSIVSPEGQTMISP 680