Pairwise Alignments

Query, 1163 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 646 a.a., VgrG protein from Variovorax sp. SCN45

 Score =  272 bits (695), Expect = 7e-77
 Identities = 193/664 (29%), Positives = 310/664 (46%), Gaps = 70/664 (10%)

Query: 13  LEDETLVVRGFHGQESLSNSVFLGQACYGFRYEVQLASRVSNLTAEQMVDKRAELKLYRN 72
           L  E L++  F   E LS           F   + + S +  +    ++   A + L R 
Sbjct: 18  LGPEDLLLDTFQATEGLSRL---------FACSLTMRSPLDTIKGADLIGTSATVTLQRP 68

Query: 73  SQLVQRVHGIVRAFSQGDIGHHHTFYQLTLVPALERLSLRHNSRIFQKQTVPEILSILLQ 132
            +  +  +GIV  F+          Y L LVP +  L+L  +  I+Q  + P+I+  +L 
Sbjct: 69  EKNARLFNGIVSRFTYLGSNQDFATYTLELVPRMWLLTLGRDRVIYQNLSTPDIVQKVLG 128

Query: 133 EMGINDYAFALKRDGVQREFCVQYRESDIDFLHRLAAEEGLVYSFVHEAGKHTLYFSDAS 192
           +  + D   AL+     RE+CV+Y E+  DF+ RL  EEG+ Y F   A  HTL  +D+ 
Sbjct: 129 DFAV-DCRTALEGTYAPREYCVRYDETAFDFVSRLMEEEGIFYFFTFTADSHTLVLADSK 187

Query: 193 DSLSKLP--EPIPYNALVGGAIDTPYIHGLTYRTQAEVSEVQLKDYSFKKPAYSFLQTVQ 250
            +    P  + +   +  GG   T  +       +    + ++ DY F  P  S L    
Sbjct: 188 SAYESCPNAQELLVRSGEGGVGHTHSVTRFESDARLVTKDHEVDDYDFLTPDTSLL---- 243

Query: 251 GTELDYQQTRYQHFDAPGRYKDDVNGAAFSQIRLDYLRRHAHTATGQSNEPLLRAGYKFD 310
             +   +  R   ++ P R       +A ++IR +  +  + +  G S+   L  G  F 
Sbjct: 244 -AKNSAKAGRGSDYEFPSRVAASA-ASARARIRQEEHQVGSQSGRGDSHCHYLTPGTTFK 301

Query: 311 LQEHLDPAMNRDWVVVSINHQGEQPQALQEDGGSGATTYSNQFSLIPGHLHWRAEP-QPK 369
           L+EH    +N ++VV S++H  E               YSN F  +P +  +R     P+
Sbjct: 302 LKEHPRADLNDEYVVHSVHHHAENEN------------YSNSFETLPLNTPFRPPRLTPR 349

Query: 370 PQVDGPMIATVVGPEGEEIFCDEHGRVKIHFPWDRYSNGNEQSSCWVRVSQGWAGSQYGF 429
           P V G   A VVGP G E++ D+HGR+K+ FPWDR    +++SSCW+RVSQ WAG  +G 
Sbjct: 350 PVVAGSHTARVVGPSGHEVWTDQHGRIKVQFPWDRLGKKDDKSSCWMRVSQIWAGEGWGA 409

Query: 430 IAIPRIGHEVIVEFLNGDPDQPIITGRTYHATNTPPYTLPEHKTKTVLRTET-HQGEGFN 488
           + +PRIG EV+V +++GDPD+P+++G  Y+ T+  P  LP   +++ +R+ +   G   N
Sbjct: 410 LFLPRIGQEVVVSYVDGDPDRPLVSGSVYNGTHVTPVELPSASSQSTIRSRSLPGGSAGN 469

Query: 489 ELSFEDQAGKEQIYLHAQKDFDGLIENDHTT--VIRHDHHLTVENDQFTQI--------- 537
           EL FED+   E++Y+HAQKD    IEND TT  +  ++ H   + ++  ++         
Sbjct: 470 ELRFEDKKDAEELYMHAQKDMRTEIENDLTTKVIAGNELHTVTKGNRTVKVDTGNETHSV 529

Query: 538 ----------------KHNQHLTVEWESREAVTGEQVLSIEGSLHVKTGKVWVNEAGTEI 581
                           K N   TV       VTG  V+ + G+L +K+ +    +AGT++
Sbjct: 530 KGTRALEVTGNETHDNKANFTQTVSGNYELKVTGNLVIDVTGTLLIKSAQTLDLKAGTDL 589

Query: 582 HVKAGQKVVIEAGSEITVKAGGSFVKVDPAGVHLSGALVNLNSGGSAGSGSGFGGAMPAL 641
              AG     EAG  ++ K G S     P          +++S  SA   +  GG M  L
Sbjct: 590 GANAGINFKAEAGVALSAKGGASLTNEAP----------SISSKASA-MNAVEGGGMVTL 638

Query: 642 PGGL 645
            GGL
Sbjct: 639 KGGL 642