Pairwise Alignments

Query, 1163 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 906 a.a., VgrG protein from Variovorax sp. SCN45

 Score =  259 bits (662), Expect = 7e-73
 Identities = 173/518 (33%), Positives = 256/518 (49%), Gaps = 52/518 (10%)

Query: 16  ETLVVRGFHGQESLSNSVFLGQACYGFRYEVQLASRVSNLTAEQMVDKRAELKLYRNSQL 75
           E L  R   G+E+LS           + ++V+L S  + +  + ++ + A + +   S  
Sbjct: 3   EALQFRKLVGREALSRL---------YAFDVELLSNSNGIDPKALLGRPATVAMQTESGG 53

Query: 76  VQRVHGIVRAFSQGDIGHHHTFYQLTLVPALERLSLRHNSRIFQKQTVPEILSILLQEMG 135
            + + GI   F  G+     +FY++TL P L   +LR + RIFQ ++VP+IL+ +L   G
Sbjct: 54  TRYLSGIASFFGLGEEDARQSFYRMTLRPWLWLATLRSDFRIFQNKSVPDILTEVLGGYG 113

Query: 136 INDYAFA--LKRDGVQREFCVQYRESDIDFLHRLAAEEGLVYSFVHEAGKHTLYFSDASD 193
              YA    L R+    ++CVQY ESD  ++ RL   EG+ Y F HE  +H L F+D   
Sbjct: 114 ---YAMEQRLSREYRAWDYCVQYHESDFSYVSRLCELEGIGYYFRHEEHRHVLVFAD--- 167

Query: 194 SLSKLPEPIPYNALVGGAIDTPYIHGLTYRTQAEVSEVQLK---------------DYSF 238
            ++   EP+P    V          G+T  ++A   E   +               DY F
Sbjct: 168 DIAASHEPLPGGGTV--RFHPSETSGMTSGSRASPGERIYEWKSGEEMRSGFHFTDDYDF 225

Query: 239 KKPAYSFL---QTVQGTELDYQQTRYQHFDAPGRYKDDVNGAAFSQIRLDYLRRHAHTAT 295
            KP+       Q   G   DY    ++ ++ PG YK   +G  +++IR +        A+
Sbjct: 226 LKPSADLSGQRQAPAGHTHDY----FERYEWPGGYKQHEDGEVYTRIRTEEQHSERCLAS 281

Query: 296 GQSNEPLLRAGYKFDLQEHLDPAMNRDWVVVSINHQGEQPQALQEDGGSGATTYSNQFSL 355
           G+SN+  L  G+ F+L  H     NR +++ S+ ++ ++     E  G G+      F  
Sbjct: 282 GRSNKRELAPGHVFELANHPRQDQNRKYLLTSVEYELQENMQASEGAGEGSVQRF-AFEA 340

Query: 356 IPGHLHWRAEPQP-KPQVDGPMIATVVGPEGEEIFCDEHGRVKIHFPWDRYSNGNEQSSC 414
            P    WR      KP+  GP  A VVGP+ EE + D HGRVK+ F WDR    NE SSC
Sbjct: 341 QPADHAWRPRRVTLKPRTRGPQTAIVVGPKNEETWTDRHGRVKVEFHWDRLGARNENSSC 400

Query: 415 WVRVSQGWAGSQYGFIAIPRIGHEVIVEFLNGDPDQPIITGRTYHATNTPPYTLPEHKTK 474
           WVRVS GWAG  +G  A+PR+GHEV+V+FLNGDPD PIITGR ++A N P + LPE    
Sbjct: 401 WVRVSMGWAGDTFGTAALPRVGHEVVVDFLNGDPDCPIITGRVFNAANMPAWRLPEQANL 460

Query: 475 TVLRT---ETHQGEGF------NELSFEDQAGKEQIYL 503
           + +R+     + G G       N L  +D  GK Q  L
Sbjct: 461 SGMRSRELNANDGPGHAGGSRGNHLVLDDHPGKIQAQL 498