Pairwise Alignments

Query, 1163 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 780 a.a., VgrG protein from Variovorax sp. SCN45

 Score =  286 bits (731), Expect = 6e-81
 Identities = 200/609 (32%), Positives = 299/609 (49%), Gaps = 46/609 (7%)

Query: 16  ETLVVRGFHGQESLSNSVFLGQACYGFRYEVQLASRVSNLTAEQMVDKRAELKL------ 69
           E L  R   GQE LS           F +EV +     N+  +Q++     L+L      
Sbjct: 14  EQLKFRAMRGQEGLSQL---------FEFEVDMVGTSFNIELKQLLGTSLTLELADDGGP 64

Query: 70  -YRNSQLVQRVHGIVRAFSQGDIGHHHTFYQLTLVPALERLSLRHNSRIFQKQTVPEILS 128
            + N  +V R   + RA   G     H  Y+  + P L  L+   + RIFQ ++VPE+L 
Sbjct: 65  RFLNGTVV-RFELVGRANETG----RHYIYRALVQPWLWYLTRTTDCRIFQNKSVPEVLD 119

Query: 129 ILLQEMGINDYAFALKRDGVQREFCVQYRESDIDFLHRLAAEEGLVYSFVHEAGKHTLYF 188
            +L + G  ++   L       E CVQY+ESD  F+ RL   EG+ Y F H  G H L  
Sbjct: 120 EVLGKYGF-EFEKRLTASYRPWENCVQYQESDFAFVSRLMEHEGIAYHFEHGNGTHLLVL 178

Query: 189 SDASDSLSKLP--EPIPYNAL--VGGAIDTPYIHGLTYRTQAEVSEVQLKDYSFKKPAYS 244
           SD +   S LP    I Y     V  A++ P I       Q     V L D+ FKK   S
Sbjct: 179 SDDTGGYSPLPGHATIAYRPRDRVLNAME-PCIDQWRVSEQITSGRVMLDDFDFKKSRAS 237

Query: 245 FLQTVQGTELDYQQTRYQHFDAPGRYKDDVNGAAFSQIRLDYLRRHAHTATGQSNEPLLR 304
            LQ+VQ     +  + Y+ ++  G Y +   G A+++IRL  L+     A G +N   + 
Sbjct: 238 -LQSVQQDPKGHDHSTYEVYEWLGGYSEHQQGDAYAKIRLQELQCAHELARGHTNVVGMA 296

Query: 305 AGYKFDLQEHLDPAMNRDWVVVSINHQGEQPQALQEDGGSGATTYSNQFSLIPGHLHWR- 363
            GY F +      A NR+++V    +  ++P+     GGS  +     F+++P  + +R 
Sbjct: 297 PGYLFQMTHCPREADNREYLVTETRYDLQEPE--YSSGGSSESVCEFDFTVLPSSVAYRP 354

Query: 364 AEPQPKPQVDGPMIATVVGPEGEEIFCDEHGRVKIHFPWDRYSNGNEQSSCWVRVSQGWA 423
           A   P+P+ +GP  ATVVGPE  EI+ D  GRVK+ F WDRY  G+E SSCWVRVS  WA
Sbjct: 355 ARNTPRPRTNGPQTATVVGPE--EIWTDRFGRVKLQFRWDRYGQGDENSSCWVRVSSSWA 412

Query: 424 GSQYGFIAIPRIGHEVIVEFLNGDPDQPIITGRTYHATNTPPYTLPEHKTKTVLRTETHQ 483
           G+ +G + +PR+G EVIV+F+ G+PD+PIITGR Y++   PP+ LP + T + + T +  
Sbjct: 413 GANFGTMHMPRVGQEVIVDFIGGEPDRPIITGRVYNSDQMPPWELPANATASGILTRSSS 472

Query: 484 GEGFNE---LSFEDQAGKEQIYLHAQKDFDGLIEND--------HTTVIRHDHHLTVEND 532
           G   N+   L FED+ G EQI+LHA+++ D  +E D         TT+I+     T ++ 
Sbjct: 473 GGAANQANMLRFEDRTGSEQIWLHAERNLDVEVEADETHTTDGTRTTLIKGHESATYQDG 532

Query: 533 QFTQIKHNQHLTVEWESREAVTGEQVLSIEGSLH--VKTGKVWVNEAGTEIHVKAGQKVV 590
           +   I      T+       VTG    ++ G ++  +  GK  +   G +  +  G    
Sbjct: 533 ETRDITAGARETITGGDTRDVTGGFTETVSGGVNQTISGGKTRMLSGGLQDTITGGVNSA 592

Query: 591 IEAGSEITV 599
           I  G   T+
Sbjct: 593 ISGGYHGTI 601