Pairwise Alignments

Query, 1163 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 1076 a.a., type VI secretion system tip protein TssI/VgrG from Variovorax sp. OAS795

 Score =  171 bits (432), Expect = 4e-46
 Identities = 136/488 (27%), Positives = 225/488 (46%), Gaps = 42/488 (8%)

Query: 42  FRYEVQLASRVSNLTAEQMVDKRAELKLYRNSQLVQRVH--GIVRAFSQGDIGHHHTFYQ 99
           +R+E+ L S  + +   +++   A LK+   +   Q     G++  F Q       TFY+
Sbjct: 41  YRFELVLVSDDARIDLARVLAANALLKILAPNDTRQATPYAGMLAEFDQLHQVGGFTFYR 100

Query: 100 LTLVPALERLSLRHNSRIF-QKQTVPEILSILLQEMGIN---DYAFALKRDGVQREFCVQ 155
             LVP L +LSL  NS ++  +QT+PEI+  +L+   +N   DY   LK     R +  Q
Sbjct: 101 AVLVPRLWQLSLYRNSEVYLHEQTIPEIVEGILKGARLNPANDYTLKLKGQYRPRSYVCQ 160

Query: 156 YRESDIDFLHRLAAEEGLVYSFVHEAGKHTLYFSDASDSLSKLPEPIPYNALVGGAIDTP 215
           Y+E+ + F+ R    EG+ Y F        L   D  D +++ P  +  N      +D  
Sbjct: 161 YQETPLAFVSRWLEREGIYYYFEQGGDADKLVLID--DKVAQPPAAVAVNYRPADELDVG 218

Query: 216 Y----IHGLTYRTQAEVSEVQLKDYSFKKPAYSFLQTVQ------GTELDYQQTRYQHFD 265
                + G   RT+     + L+DY+ ++ +   +   +      G E+ Y +       
Sbjct: 219 LAPDSVQGFVCRTRPLPKTLVLQDYNHRRASMPLVAQAEVSTSGIGEEMLYGEN------ 272

Query: 266 APGRYKDDVNGAAFSQIRLDYLRRHAHTATGQSNEPLLRAGYKFDLQEHLDPAMNRDWVV 325
               ++ +  G  ++ IR + LR      +G++    LR+G+  +L +H     N  ++V
Sbjct: 273 ----FRTEEEGQRYASIRAEELRCGGRAFSGEATAVGLRSGHFMELTQHYRDDFNGRYLV 328

Query: 326 VSINHQGEQPQALQE------DGGSGATTYSNQFSLIPGHLHWR-AEPQPKPQVDGPMIA 378
             I H+G Q  AL        +   G T Y N F  +P    +R A   PKP+V G M A
Sbjct: 329 TEITHEGSQAGALLAGLKTPFNEREGQTAYRNSFVALPAATQFRPARSTPKPRVAGTMSA 388

Query: 379 TVVGP-EGEEIFCDEHGRVKIHFPWDRYSNGNEQSSCWVRVSQGWAGSQYGFIAIPRIGH 437
           TV     GE    DEHG+ K+  P+DR   G  + S  VR++  +AGS++G       G 
Sbjct: 389 TVDAEGSGEYAELDEHGQYKVQIPFDRTEKGAAKGSAPVRMASPYAGSEHGMHFPLHKGT 448

Query: 438 EVIVEFLNGDPDQPIITGRTYHATNTPPYTLPEHKTKTVLRTETHQGEGFNELSFEDQAG 497
           EV++ F +GDPDQP+I G   ++  TP      +    ++ T     +G N++   D  G
Sbjct: 449 EVLLSFADGDPDQPVILGAVPNSV-TPNVVDQRNPHDNLIST-----KGGNQMLMADTKG 502

Query: 498 KEQIYLHA 505
           KE I+L++
Sbjct: 503 KEVIWLNS 510