Pairwise Alignments

Query, 1163 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 1016 a.a., type VI secretion system tip protein TssI/VgrG from Variovorax sp. OAS795

 Score =  156 bits (395), Expect = 7e-42
 Identities = 130/489 (26%), Positives = 221/489 (45%), Gaps = 43/489 (8%)

Query: 42  FRYEVQLASRVSNLTAEQMVDKRAELKLYRNSQLVQRVH--GIVRAFSQGDIGHHHTFYQ 99
           +R+E+ L S  + +   +MV   A+L++       +     G++  F Q       TFY+
Sbjct: 41  YRFELVLVSDDAAIDFAKMVGSGAQLRILAPDDHTRATPYAGMLAEFDQLHQAGGFTFYR 100

Query: 100 LTLVPALERLSLRHNSRIF-QKQTVPEILSILL---QEMGINDYAFALKRDGVQREFCVQ 155
             LVP L +LSL  NS ++  +QT+PEI+  LL   +     DY   L        +  Q
Sbjct: 101 AVLVPRLWQLSLYRNSEVYLNEQTIPEIVESLLVGARFSASRDYTLKLTGTYRPHSYVCQ 160

Query: 156 YRESDIDFLHRLAAEEGLVYSFVHEAGKHTLYFSDASDSLSKLPEPIPYNALVGGAIDTP 215
           Y+E+ + F+ R    EG+ Y F  + G   L   D  D +++  E +  N      +D  
Sbjct: 161 YQETPLAFVSRSFEREGIYYYFEQDGGVDRLVLLD--DKVAQPAEALAVNYRPADELDVG 218

Query: 216 Y----IHGLTYRTQAEVSEVQLKDYSFKKPAYSFLQTVQ------GTELDYQQTRYQHFD 265
                +     R++     + L+DY+ ++         +      G E+ Y +       
Sbjct: 219 LAPDSVQAFVCRSRMLPRTLVLQDYNHRRANLPLEVKAEVSASGLGEEMLYGEN------ 272

Query: 266 APGRYKDDVNGAAFSQIRLDYLRRHAHTATGQSNEPLLRAGYKFDLQEHLDPAMNRDWVV 325
               ++ +  G  ++ IR + LR  A   +G++    LR+G+   L  H     N  ++V
Sbjct: 273 ----FRSEEEGQRYATIRAEELRCGARVFSGEATAVGLRSGHFMVLSHHYRADFNGRYLV 328

Query: 326 VSINHQGEQPQALQE-------DGGSGATTYSNQFSLIPGHLHWR-AEPQPKPQVDGPMI 377
             I H+G Q  AL +       +G    T+Y N F  +P    +R A   PKP+V G M 
Sbjct: 329 TEITHEGSQAGALLDGLKTPFNEGERQTTSYRNSFVALPAATQFRPARTTPKPRVSGTMN 388

Query: 378 ATVVGP-EGEEIFCDEHGRVKIHFPWDRYSNGNEQSSCWVRVSQGWAGSQYGFIAIPRIG 436
           AT+     GE    D +G+ K+  P+DR   G  + S  +R++  +AGS +G       G
Sbjct: 389 ATIDAEGSGEYAELDAYGQYKVQIPFDRTEKGAAKGSRPMRMASPYAGSDHGMHFPLHKG 448

Query: 437 HEVIVEFLNGDPDQPIITGRTYHATNTPPYTLPEHKTKTVLRTETHQGEGFNELSFEDQA 496
            EV++ F++GDPD+P+I G   ++ N        +   +++RT     +G NE+ F+D  
Sbjct: 449 AEVLLSFVDGDPDRPVILGAVPNSDNRSVVD-STNPQLSMIRT-----KGGNEIGFDDTR 502

Query: 497 GKEQIYLHA 505
           G E I+L +
Sbjct: 503 GNEGIWLRS 511