Pairwise Alignments

Query, 1163 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 800 a.a., type VI secretion system tip protein TssI/VgrG from Variovorax sp. OAS795

 Score =  236 bits (603), Expect = 4e-66
 Identities = 191/631 (30%), Positives = 284/631 (45%), Gaps = 69/631 (10%)

Query: 83  VRAFSQGDIGHHHTFYQLTLVPALERLSLRHNSRIFQKQTVPEILSILLQEMGINDYAFA 142
           VR    G +G H   Y++ L      L+ R NSRI Q + V E+L  + ++  I  +   
Sbjct: 79  VRFERTGHVGRHFE-YRIGLRSWFWLLTKRSNSRILQDKKVLEVLDAVFEDSPIKRFK-K 136

Query: 143 LKRDGV-----QREFCVQYRESDIDFLHRLAAEEGLVYSFVHEAGKHTLYFSDASD-SLS 196
            K D V      R +CVQ++ESD  FL RL  +EG+ Y F       T++ SDASD +  
Sbjct: 137 TKADNVIGTHNPRRYCVQHQESDYQFLSRLLEDEGIYYWFDAHDAPGTMHLSDASDIAHD 196

Query: 197 KLPEPIPYNALVGGAIDTPY--IHGLTYRTQAEVSEVQLKDYSFKKPAYSFLQTVQGTEL 254
           KLP       + G A +  +  I       Q +  +   +D  FK      L+   G   
Sbjct: 197 KLPVEGTLRHVAGDASEARHNEISRWVSARQFDTGKYASQDSDFKAIKKK-LEAAGGEPD 255

Query: 255 DYQQTRYQHFDAPGRYKDDVNGAAFSQIRLDYL--RRHAHTATGQSNEPLLRAGYKFDLQ 312
            ++   ++ F+  G Y    +     ++R + +  RR  H A   +  P + AG  F  Q
Sbjct: 256 KHELAEFEAFEYAGGYFSGADADDKGKLRGEEIGARRQRHWAL--TTWPDVAAGRSFTFQ 313

Query: 313 EHLDPAMNRDWVVVSINHQGEQP---------------QALQE---DGGSGATTYSNQFS 354
           +  D   + D+++ +       P               +AL+E   D    A       +
Sbjct: 314 DDPDGTRDGDYIIAACTFVASHPGYESLTHDLPSATPERALREALADDAVNAEALPALEA 373

Query: 355 LIPGHLHWRAEPQ----------------------PKPQVDGPMIATVVGPEGEEIFCDE 392
           LI      R  PQ                      P+  + GP  A VVGP GEEI  D+
Sbjct: 374 LIADAPALRTGPQGTSAFLLTAIPVDVPFHPPRLTPRVVMPGPQSAIVVGPAGEEIHADD 433

Query: 393 HGRVKIHFPWDRYSNGNEQSSCWVRVSQGWAGSQYGFIAIPRIGHEVIVEFLNGDPDQPI 452
            GRVK+HF WDRY   +E+S+CWVRVSQ WAG  +G   IPRIG EVIV+FLNGDPD+PI
Sbjct: 434 FGRVKVHFHWDRYDKSDEKSTCWVRVSQPWAGKGWGGYFIPRIGQEVIVDFLNGDPDRPI 493

Query: 453 ITGRTYHATNTPPYTLPEHKTKTVLRTETHQGEGFNELSFEDQAGKEQIYLHAQKDFDGL 512
           I GR Y+     P+            T        NE  FED+ G EQ+YLHA+K+ D  
Sbjct: 494 IVGRVYNDDQPIPFGSHTQSGFRTRSTPKGSASNCNEFRFEDKKGSEQVYLHAEKNQDIE 553

Query: 513 IENDHTTVIRHDHHLTVENDQFTQIKHNQHLTVEWESREAVTGEQVLSIEGSLHVKTGKV 572
           +END T  + HD   T+++D+ T +KH++  TV+      V G++  +++     K   +
Sbjct: 554 VENDETHWVGHDRAKTIDHDETTHVKHDRTETVDNNETITVHGQRTETVD-----KNETI 608

Query: 573 WVNEAGTEIHVKAGQKVVIEAGSEITVKAGGSFVKVDPAGVHLSGA-LVNLNSGGSAGSG 631
            +++  TE  V   + + I     ITV A       + A V L     V +N   + G+ 
Sbjct: 609 TIHQNRTET-VDLNETISIGQNRSITVGAS------ETATVALQRTHSVGINETITVGAA 661

Query: 632 SGFG-GAMPALPGGLEPAVALAPPQTISYQA 661
                GAM A+  G    + +   Q+++  A
Sbjct: 662 QEITVGAMQAVTVGASQTINVGANQSVTIGA 692



 Score = 32.7 bits (73), Expect = 1e-04
 Identities = 25/110 (22%), Positives = 45/110 (40%), Gaps = 9/110 (8%)

Query: 527 LTVENDQFTQIKHNQHLTVEWESREAVTGEQVLSIEGSLHVKTGKVWVNEAGT------- 579
           +TV   Q   +  NQ +T+  +  E++   +V+ +   L V  G       G        
Sbjct: 672 VTVGASQTINVGANQSVTIGADQTESIGANRVVKVGAKLAVNVGSDASMTVGAGRSASID 731

Query: 580 -EIHVKAGQKVVIEAGSEITVKAG-GSFVKVDPAGVHLSGALVNLNSGGS 627
            +     G+K V++AG EI++  G  S V      + + G  + +   GS
Sbjct: 732 KDDSFSVGKKFVVDAGDEISLTTGSASIVMKKDGSITIRGKDILIEGSGS 781