Pairwise Alignments

Query, 1163 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 618 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  286 bits (731), Expect = 5e-81
 Identities = 188/620 (30%), Positives = 315/620 (50%), Gaps = 61/620 (9%)

Query: 15  DETLVVRGFHGQESLSNSVFLGQACYGFRYEVQLASRVSNLTAEQMVDKRAELKLYRNSQ 74
           ++  ++  F G E LS           + +++ L S+ S++  + ++  +A +++  ++ 
Sbjct: 27  NDEFLLEHFSGTEELSKL---------YEFDLALLSQQSDVKLKSLIGSQATVEIELSNG 77

Query: 75  LVQRVHGIVRAFSQGDIGHHHTFYQLTLVPALERLSLRHNSRIFQKQTVPEILSILLQEM 134
             + ++G V+ FS       +  Y   L P L  L+ R ++RIFQ+++V  ++S +    
Sbjct: 78  SFRHINGYVQRFSTQGSDGGYVRYAAVLGPWLWMLTCRFDTRIFQEKSVQAVVSEVFAGF 137

Query: 135 G-INDYAFALKRDGVQREFCVQYRESDIDFLHRLAAEEGLVYSFVHEAGKHTLYFSDASD 193
           G +  Y F + +      +  QYRESD +F+ RL   EGL Y F H A  H +  +D S 
Sbjct: 138 GTLAKYEFRVSKPLKSHSYITQYRESDFNFVQRLLESEGLFYYFEHTADSHLMVITDDSS 197

Query: 194 SLSKLPEPIP---YNALVGGAIDTPYIHGLTYRTQAEVSEVQLKDYSFKKPAYSFLQTVQ 250
           +L  LPE      ++A V    D+  I       Q +  ++ ++ + +++P      T+Q
Sbjct: 198 TLLPLPEQPQIRYHSASVTETADS--ITQWQSTRQLQSGQIAVRTFDYRQPRNFLPVTMQ 255

Query: 251 GTELDYQQTRYQHFDAPGRYKDDV--NGAAFSQIRLDYLRRHAHTATGQSNEPLLRAGYK 308
                    R++ +D PG+Y      +G A  + R++ L     T  G+SN   ++ GY 
Sbjct: 256 SLNQQGDVDRFEIYDFPGQYTHGSYEDGEAIVRNRIEALELMGKTFYGESNCRAMKPGYT 315

Query: 309 FDLQEHL----DPAMNRDWVVVSINHQGEQPQALQEDGGSGATTYSNQFSLIPGHLHWRA 364
           F+L +H       A NR ++++S+ H+G       +  G     Y N+F  +   + +R 
Sbjct: 316 FELTQHYLHDTGAAENRKFLLLSVEHRGSNNYMTGDQAG-----YVNRFVCVRKKIAYRP 370

Query: 365 EPQP-KPQVDGPMIATVVGPEGEEIFCDEHGRVKIHFPWDRYSNGNEQSSCWVRVSQGWA 423
           +    KP ++GP  A VVGP GEEIF DE GRVK+ F WDR    N+QSSCWVRV+Q  A
Sbjct: 371 QLNTRKPLINGPQTAIVVGPPGEEIFTDELGRVKLQFHWDRQGQFNDQSSCWVRVAQSGA 430

Query: 424 GSQYGFIAIPRIGHEVIVEFLNGDPDQPIITGRTYHATNTPPYTLPEHKTKTVLRTETHQ 483
              +G I IPR+G EV+V FL+G+PD+P+I G  Y++TNTPP++LP +KT++   T + +
Sbjct: 431 SGGFGSIQIPRVGDEVVVVFLDGNPDRPLIMGSLYNSTNTPPWSLPANKTQSGFLTRSMK 490

Query: 484 GEG--FNELSFEDQAGKEQIYLHAQKDFDGLIENDHTTVIRHDHHLTVENDQFTQIKHNQ 541
           G+G   N   FED+AG EQI +HA+++ D  IE D T    HD            + +N+
Sbjct: 491 GDGGTANFFRFEDKAGAEQIIMHAERNMDTEIELDET----HD------------VGNNR 534

Query: 542 HLTVEWESREAVTGEQVLSI-EGSLHVKTGKVWVNEAGTEIHVKAGQKVVIEAGSEITVK 600
            +TV     E V  + V+ + EGS  ++                  Q + + A   I ++
Sbjct: 535 SITVGGTHTETVKKDTVVQVTEGSYTLQVD---------------NQFIQVAAKQHIILQ 579

Query: 601 AGGSFVKVDPAGVHLSGALV 620
            G S + + P G+ + G ++
Sbjct: 580 VGDSSITLTPEGIEIKGKVI 599