Pairwise Alignments

Query, 1163 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 646 a.a., type VI secretion system tip protein VgrG from Pseudomonas fluorescens SBW25

 Score =  332 bits (851), Expect = 6e-95
 Identities = 202/623 (32%), Positives = 327/623 (52%), Gaps = 21/623 (3%)

Query: 42  FRYEVQLASRVSNLTAEQMVDKRAELKLYRNSQLVQRVHGIVRAFSQGDIGHHHTFYQLT 101
           F YE+QL S  +N+   Q++ K   + L       +  HGIV   SQ         YQ+T
Sbjct: 36  FNYELQLTSLDANIDLNQLLGKPMSVGLQLADGGERHFHGIVARCSQNIDQGQFASYQVT 95

Query: 102 LVPALERLSLRHNSRIFQKQTVPEILSILLQEMGINDYAFALKRDGVQREFCVQYRESDI 161
           L P L  LS   + RIFQ  ++P+I+  + +++G +D+  AL R   + E+CVQYRE+  
Sbjct: 96  LRPWLWLLSRTSDCRIFQNLSIPQIIKQVFRDLGFSDFEDALSRPYREWEYCVQYRETSF 155

Query: 162 DFLHRLAAEEGLVYSFVHEAGKHTLYFSDASDSLSKLP--EPIPYNALVGGAIDTPYIHG 219
           DF+ RL  +EG+ Y F HE  +H L  +DA  + + +P    IPY        +  ++H 
Sbjct: 156 DFVSRLMEQEGIYYFFRHEQDRHVLVLADAYGAHTTVPGYASIPYYPKDEQQRERDHMHN 215

Query: 220 LTYRTQAEVSEVQLKDYSFKKPAYSFLQTVQGTELDYQQTRYQHFDAPGRYKDDVNGAAF 279
                + +   ++L DY F++P+ S +         +    Y  +D PG Y    +G  +
Sbjct: 216 WHLAQEVQPGSLELNDYDFQRPSAS-IDVRSAMPRPHTAGDYPLYDYPGTYVQSADGEHY 274

Query: 280 SQIRLDYLRRHAHTATGQSNEPLLRAGYKFDLQEHLDPAMNRDWVVVSINHQGEQPQALQ 339
           ++ R++ L+          N   L +G+ F L        NR++++V I +   Q ++L+
Sbjct: 275 ARTRIEALQTLHEQIEFSGNARGLGSGHLFSLTGFSRQDQNREYLIVGIRYYIVQ-ESLE 333

Query: 340 EDGGSGATTYSNQFSLIPGHLHWRAEPQP-KPQVDGPMIATVVGPEGEEIFCDEHGRVKI 398
             GGSG   + +  + I     +R      +P V GP  A VVGP+GEEI+ D++GRVK+
Sbjct: 334 SGGGSGGAQFESSLTCIDAQQSFRPLASTHRPIVKGPQTALVVGPKGEEIWTDQYGRVKV 393

Query: 399 HFPWDRYSNGNEQSSCWVRVSQGWAGSQYGFIAIPRIGHEVIVEFLNGDPDQPIITGRTY 458
           HF WDR+   NE SSCW+RVSQ WAG  +G + IPRIG EVIV FL GDPD+PI+TGR Y
Sbjct: 394 HFYWDRHDQSNENSSCWIRVSQSWAGKNWGSMQIPRIGQEVIVSFLEGDPDRPIVTGRVY 453

Query: 459 HATNTPPYTLPEHKTKTVLRTETHQG---EGFNELSFEDQAGKEQIYLHAQKDFDGLIEN 515
           +A  T PY LPE+ T++ +++ + +G     FNE+  ED+ G EQ+Y+HA+++ D ++E 
Sbjct: 454 NAEQTVPYDLPENATQSGMKSRSSKGGTPANFNEIRMEDKKGLEQLYIHAERNQDIVVEV 513

Query: 516 DHTTVIRHDHHLTVENDQFTQIKHNQHLTVEWESREAVTGEQVLSIEGSLHVKTGKVWVN 575
           D +  + HD + ++ +D+   I +N+   V+ E    V   +  SI  S        +V 
Sbjct: 514 DESHSVGHDRNKSIGHDETVTIGNNRTRIVKQEDVLVVGQRKTDSISQS--------YVI 565

Query: 576 EAGTEIHVKAGQKVV-IEAGSEITVKAGG-SFVKVDPAGVHLSGALVNLNSGGSAGSGSG 633
           E G  + +  G+ ++ + A  +I +     SF     A  +  G L +LN+G   G+   
Sbjct: 566 EVGENLRLVCGESILELNASGQINLTGVNISFYASGDAEFNTKGVL-HLNNGNGPGASPE 624

Query: 634 FGGAMPALPGGLEPAVALAPPQT 656
             G   ++   ++   +  PP++
Sbjct: 625 GQGIKKSIDANVK--ASFPPPKS 645