Pairwise Alignments

Query, 1163 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 671 a.a., type VI secretion system tip protein VgrG from Erwinia tracheiphila SCR3

 Score =  440 bits (1132), Expect = e-127
 Identities = 248/634 (39%), Positives = 355/634 (55%), Gaps = 17/634 (2%)

Query: 4   LAYSIEVEGLEDETLVVRGFHGQESLSNSVFLGQACYGFRYEVQLASRVSNLTAEQMVDK 63
           L +++ V G      VV  F   ESLS+   L         +V L S   ++   +++D 
Sbjct: 45  LQFTLTVTGQAAALFVVSDFSLTESLSSPWTL---------DVNLVSAEPDVDFARVLDG 95

Query: 64  RAELKLYRNSQLVQRVHGIVRAFSQGDIGHHHTFYQLTLVPALERLSLRHNSRIFQKQTV 123
            A L + +   L+++V G++ AF QG+ G H T Y++TL P L R SLR N RIFQ+QT 
Sbjct: 96  HATLNILQGGTLLRKVSGMIAAFEQGNTGLHQTQYRMTLRPELWRTSLRRNCRIFQQQTP 155

Query: 124 PEILSILLQEMGINDYAFALKRDGVQREFCVQYRESDIDFLHRLAAEEGLVYSFVHEAGK 183
            +I++ LL+E GI +  F L+     REFCVQY+E D+ F+ RL+AEEG+ Y F      
Sbjct: 156 EDIITTLLRERGILNARFVLRYPHPAREFCVQYQEDDLSFIQRLSAEEGICYWFDSNQDG 215

Query: 184 HTLYFSDASDSLSKLPEPIPYNALVGGAIDTPYIHGLTYRTQAEVSEVQLKDYSFKKPAY 243
             ++  DA    + L   +P+N           ++      Q + + VQLKDY+FK+P +
Sbjct: 216 KMVFADDAGPLPADLS--LPWNPDAQPQTGEFCVNQFIRSAQVKAASVQLKDYTFKRPLW 273

Query: 244 SFLQTVQGTELDYQQTRYQHFDAPGRYKDDVNGAAFSQIRLDYLRRHAHTATGQSNEPLL 303
             L T +  +L  Q+  Y+++  P R+KDD +G  +++  L+ LR  A    G SN P L
Sbjct: 274 YGLFTEEARKLHNQRPDYEYYMFPERFKDDQHGQDYTRYHLEGLRNDADGGYGISNAPQL 333

Query: 304 RAGYKFDLQEHLDPAMNRDWVVVSINHQGEQPQALQEDGGSGATTYSNQFSLIPGHLHWR 363
             G  F L  H   ++N  W VVSI H G QPQAL+       TT  N+F+ IP H  WR
Sbjct: 334 FPGLLFTLTSHPRASLNTRWQVVSITHTGSQPQALERASQEQGTTLGNRFTFIPAHQTWR 393

Query: 364 AEPQPKPQVDGPMIATVVGPEGEEIFCDEHGRVKIHFPWDRYSNGNEQSSCWVRVSQGWA 423
             P PKP+VDG  I  VVGP  EEI+CD+HGRV++ FPWDRY   +++SSCW+RVSQ WA
Sbjct: 394 PAPLPKPRVDGAQIGIVVGPPDEEIYCDDHGRVRVQFPWDRYGCSDDKSSCWIRVSQPWA 453

Query: 424 GSQYGFIAIPRIGHEVIVEFLNGDPDQPIITGRTYHATNTPPYTLPEHKTKTVLRTETHQ 483
           G+ +G IA PRIG EVIV+FL+GDPDQPII GRTYHA N P   LP  KT+   R++TH+
Sbjct: 454 GNGWGMIATPRIGQEVIVDFLHGDPDQPIIIGRTYHANNLPSIGLPAAKTQMAFRSKTHK 513

Query: 484 GEGFNELSFEDQAGKEQIYLHAQKDFDGLIENDHTTVIRHDHHLTVENDQFTQIKHNQHL 543
           GEG+NEL FED  G+E + +HAQKD    I ND TT +  +H  TV+ +Q  QI+     
Sbjct: 514 GEGYNELMFEDANGQEMLSMHAQKDMSTHINNDRTTTVGANHSETVKGNQRVQIQEGNRT 573

Query: 544 TVEW---ESREAVTGEQVLSIEGSLHVKTGKVWVNEAGTEIHVKAGQKVVIEAGSEITVK 600
            +     ES+    G     I     +    + V   G +    +G ++ + A + I++ 
Sbjct: 574 VIVSKGDESKSVKAGALTEDIAKEKSITADSINVFATGAQGGESSGLQMFL-AKNGISLG 632

Query: 601 AGGSFVKVDPAGV--HLSGALVNLNSGGSAGSGS 632
            G S + + P  +  H+  +++ L   G   +GS
Sbjct: 633 VGDSQITLTPDAIVLHIGDSVIQLGKDGITINGS 666