Pairwise Alignments

Query, 1163 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 643 a.a., type VI secretion system tip protein VgrG from Erwinia tracheiphila SCR3

 Score =  279 bits (714), Expect = 4e-79
 Identities = 182/564 (32%), Positives = 280/564 (49%), Gaps = 29/564 (5%)

Query: 16  ETLVVRGFHGQESLSNSVFLGQACYGFRYEVQLASRVSNLTAEQMVDKRAELKLYRNSQL 75
           E L+     G+E+LS       AC  F   VQL    + +  + ++ +   L +     L
Sbjct: 12  EGLLFWKLSGREALS-------AC--FELTVQLLGTDARIDRKSLLGQSISLSIPMQGLL 62

Query: 76  VQRVHGI------VRAFSQGDIGHHHTFYQLTLVPALERLSLRHNSRIFQKQTVPEILSI 129
              V  +      V   SQ   G  +  Y + + P L  L    N RIFQ QTV +I+  
Sbjct: 63  SGGVRWLNGKITRVGVHSQELNGTRYAVYSVVMEPDLWPLKRDRNLRIFQSQTVVQIVKT 122

Query: 130 LLQEMGINDYAFALKRDGVQR--EFCVQYRESDIDFLHRLAAEEGLVYSFVHEAGKHTLY 187
           LL E G+N      +  G  R  E+CVQY+ES   F+ RL   EG+ Y F HE  KHTL 
Sbjct: 123 LLGEYGVN---VEDRLTGSYRVWEYCVQYQESSFAFISRLMELEGIYYFFGHEQDKHTLV 179

Query: 188 FSDASDSLSKLP--EPIPYNALV-GGAIDTPYIHGLTYRTQAEVSEVQLKDYSFKKPAYS 244
            +D++         E IPY+    GG+     I       Q         DY F+KP   
Sbjct: 180 LADSTQQHQPYAGYENIPYHVTPSGGSTSEEGISLWELHDQVTPGIYSTDDYDFRKPNAW 239

Query: 245 FLQTVQGTELDYQQTRYQHFDAPGRYKDDVNGAAFSQIRLDYLRRHAHTATGQSNEPLLR 304
            LQ  Q   +     +   +D PG + +  +G  +++IR +  +      +G      L 
Sbjct: 240 MLQARQNP-VSPSPGQIDVYDWPGHFVEHDHGEFYAKIRQEVWQVEHQQISGVGTAVGLA 298

Query: 305 AGYKFDLQEHLDPAMNRDWVVVSINHQGEQPQALQEDGGSGATTYSNQFSLIPGHLHWRA 364
            GY F L      + N +++     ++ E+       G  G TT+S +F++IP  + +RA
Sbjct: 299 PGYTFMLSNAPFFSDNGEYLTTEAYYEFEENS--YATGSDGGTTHSIRFTVIPSEVTYRA 356

Query: 365 EPQPK-PQVDGPMIATVVGPEGEEIFCDEHGRVKIHFPWDRYSNGNEQSSCWVRVSQGWA 423
           EP    P+  GP  A VVGP+GE I+ D++GR+K+ F WDR + G++ SSCWVRVS  WA
Sbjct: 357 EPLTAWPRTHGPQTAKVVGPKGESIWTDKYGRIKVKFHWDRLAKGDDTSSCWVRVSSAWA 416

Query: 424 GSQYGFIAIPRIGHEVIVEFLNGDPDQPIITGRTYHATNTPPYTLPEHKTKT--VLRTET 481
           G  YG + IPR+G EV+++F+NGDPD+PI+TGR Y+  + PP+ LP   T+   + RT+ 
Sbjct: 417 GQGYGGVQIPRVGDEVVIDFINGDPDRPIVTGRVYNEASMPPWALPAAATQMGFLSRTKD 476

Query: 482 HQGEGFNELSFEDQAGKEQIYLHAQKDFDGLIENDHTTVIRHDHHLTVENDQFTQIKHNQ 541
              E  N L FED+AG+EQ+++ AQK+ D  ++ND    +  +  + V+    + +  + 
Sbjct: 477 GSAETANALRFEDKAGEEQLWIQAQKNMDTHVKNDEIHAVGGNRTIAVQKSYSSTVSGSY 536

Query: 542 HLTVEWESREAVTGEQVLSIEGSL 565
               +W   E V G+ ++  +G +
Sbjct: 537 DQKTQWSRSELVGGDYLMQTQGGI 560