Pairwise Alignments

Query, 1163 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 633 a.a., type VI secretion system tip protein VgrG from Escherichia coli ECRC99

 Score =  437 bits (1125), Expect = e-126
 Identities = 255/627 (40%), Positives = 359/627 (57%), Gaps = 38/627 (6%)

Query: 4   LAYSIEVEGLEDETLVVRGFHGQESLSNSVFLGQACYGFRYEVQLASR-VSNLTAEQMVD 62
           L +++EV+GL  +   V  FH  +SLS+          F  ++ L S+   +L   Q++D
Sbjct: 5   LRFTLEVDGLPPDAFAVVSFHLTQSLSSL---------FSLDLSLVSQQFLSLEFAQVLD 55

Query: 63  KRAELKLYRNSQLVQRVHGIVRAFSQGDIGHHHTFYQLTLVPALERLSLRHNSRIFQKQT 122
           K A L +++   + +RV G+V  F  G+   +   Y + + P L R  LR N RIFQ + 
Sbjct: 56  KMAYLTIWQGDDVQRRVKGVVTWFELGENDKNQMLYSMKVHPPLWRAGLRQNFRIFQNED 115

Query: 123 VPEILSILLQEMGINDYAFALKRDGVQREFCVQYRESDIDFLHRLAAEEGLVYSFVHEAG 182
           +  IL  +LQE G+ +++         REFCVQY E+D DFL R+AAEEG+ +   H A 
Sbjct: 116 IKSILGTILQENGVTEWSPLFSEPHPSREFCVQYGETDYDFLCRMAAEEGIFFYEEH-AY 174

Query: 183 KHTLYFSDASDSLSKLPEP--IPYNALVGGAIDTPYIHGLTYRTQAEVSEVQLKDYSFKK 240
           K T       D++  LPE   IP+N      + T  I    Y  Q   S V  KDY+FK+
Sbjct: 175 KSTDQSLVLCDTVRHLPESFEIPWNPNTRTEVSTLCISQFRYSAQIRPSSVVTKDYTFKR 234

Query: 241 PAYSFLQTVQGTELDYQQTRYQHFDAPGRYKDDVNGAAFSQIRLDYLRRHAHTATGQSNE 300
           P ++     +G   DYQ+T+Y+ +D PGR+K   +G  F++ +++  R +A TA G S  
Sbjct: 235 PGWAGRFDQEGQHQDYQRTQYEVYDYPGRFKG-AHGQNFARWQMEGWRNNAETARGMSRS 293

Query: 301 PLLRAGYKFDLQEHLDPAMNRDWVVVSINHQGEQPQALQEDGGSGATTYSNQFSLIPGHL 360
           P +  G +  L  H    +NR+W VV+    GEQPQA+    G+G T   N F++IP   
Sbjct: 294 PEIWPGRRIVLTGHPQANLNREWQVVASELHGEQPQAVPGRRGAG-TALENHFAVIPADR 352

Query: 361 HWRAEPQPKPQVDGPMIATVVGPEGEEIFCDEHGRVKIHFPWDRYSNGNEQSSCWVRVSQ 420
            WR +P+ KP VDGP  A V GPEGEEIFCDEHGRV++ F WDRY+  ++ SSCW+RV+Q
Sbjct: 353 TWRPQPRLKPLVDGPQSAVVTGPEGEEIFCDEHGRVRVKFNWDRYNPADQDSSCWIRVAQ 412

Query: 421 GWAGSQYGFIAIPRIGHEVIVEFLNGDPDQPIITGRTYHATNTPPYTLPEHKTKTVLRTE 480
            WAG+ +G +AIPR+G EVIV+FLNGDPDQPII GRTYH  N  P +LP  KT+  +R++
Sbjct: 413 AWAGTGFGNLAIPRVGQEVIVDFLNGDPDQPIIMGRTYHQENRTPGSLPGTKTQMTIRSK 472

Query: 481 THQGEGFNELSFEDQAGKEQIYLHAQKDFDGLIENDHTTVIRHDHHLTVENDQFTQIKH- 539
           T+ G GFNEL F+D  G+EQ+Y+HAQK+ D  + ND TT ++HDH  TV+NDQ   I+  
Sbjct: 473 TYMGSGFNELKFDDATGREQVYIHAQKNMDTEVLNDRTTTVKHDHRETVKNDQTVTIQEG 532

Query: 540 NQHLTVEWESREAVTG-------EQVL----SIEGSLHVKTGKVWVNEAGTEIHVKAGQK 588
           N+ LTV  E    +TG       E V     +I GS+HV      VN  G    ++A   
Sbjct: 533 NRLLTV--EKGHKITGVLKGSLSEDVFQDRGTIAGSVHVDA----VNNGGEGNGIQA--- 583

Query: 589 VVIEAGSEITVKAGGSFVKVDPAGVHL 615
               A  EI +    S + + P G+ L
Sbjct: 584 --YTAIKEIMLAVEESKIALTPDGIQL 608