Pairwise Alignments

Query, 1163 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 702 a.a., type VI secretion system effector VgrG from Escherichia coli ECRC101

 Score =  426 bits (1095), Expect = e-123
 Identities = 234/569 (41%), Positives = 338/569 (59%), Gaps = 16/569 (2%)

Query: 4   LAYSIEVEGLEDETLVVRGFHGQESLSNSVFLGQACYGFRYEVQLASR-VSNLTAEQMVD 62
           L +++EV+GL  +   V  FH  +SLS+          F  ++ L S+   +L   Q++D
Sbjct: 5   LRFTLEVDGLPPDAFAVVSFHLNQSLSSL---------FSLDLSLVSQQFLSLEFAQVLD 55

Query: 63  KRAELKLYRNSQLVQRVHGIVRAFSQGDIGHHHTFYQLTLVPALERLSLRHNSRIFQKQT 122
           K A L +++   + +RV G+V  F  G+   +   Y + + P L R  LR N RIFQ + 
Sbjct: 56  KMAYLTVWQGDDVQRRVKGVVTWFELGENDKNQMLYSMKVCPPLWRTGLRQNFRIFQNED 115

Query: 123 VPEILSILLQEMGINDYAFALKRDGVQREFCVQYRESDIDFLHRLAAEEGLVYSFVHEAG 182
           +  IL+ +L+E G+ +++         REFCVQY E+D DFL R+AAEEG+ +   H A 
Sbjct: 116 IESILATILKENGVTEWSPLFSEPHPSREFCVQYGETDYDFLCRMAAEEGIFFYEEH-AQ 174

Query: 183 KHTLYFSDASDSLSKLPEP--IPYNALVGGAIDTPYIHGLTYRTQAEVSEVQLKDYSFKK 240
           K         D++  LPE   IP+N      + T  I    Y  Q   S V  KDY+FK+
Sbjct: 175 KSIDQSLVLCDTVRYLPESFEIPWNPNTRTEVSTLCISQFRYSAQIRPSSVVTKDYTFKR 234

Query: 241 PAYSFLQTVQGTELDYQQTRYQHFDAPGRYKDDVNGAAFSQIRLDYLRRHAHTATGQSNE 300
           P ++     +G   DYQ+T+Y+ +D PGR+K   +G  F++ ++D  R +A  A G S  
Sbjct: 235 PGWAGRFDQEGQYQDYQRTQYEVYDYPGRFKG-AHGQNFARWQMDGWRNNAEVARGTSRS 293

Query: 301 PLLRAGYKFDLQEHLDPAMNRDWVVVSINHQGEQPQALQEDGGSGATTYSNQFSLIPGHL 360
           P +  G +  L  H    +NR+W VV+    GEQPQA+    GSG TT +N F++IP   
Sbjct: 294 PEIWPGRRIVLTGHPQANLNREWQVVASELHGEQPQAVPGRRGSG-TTLNNHFAVIPADR 352

Query: 361 HWRAEPQPKPQVDGPMIATVVGPEGEEIFCDEHGRVKIHFPWDRYSNGNEQSSCWVRVSQ 420
            WR +P  KP VDGP  A V GP GEEIFCDEHGRV++ F WDRY+  N+ SSCW+RV+Q
Sbjct: 353 TWRPQPLLKPLVDGPQSAVVTGPAGEEIFCDEHGRVRVKFNWDRYNPSNQDSSCWIRVAQ 412

Query: 421 GWAGSQYGFIAIPRIGHEVIVEFLNGDPDQPIITGRTYHATNTPPYTLPEHKTKTVLRTE 480
            WAG+ +G +AIPR+G EVIV+FLNGDPDQPII GRTYH  N  P +LP  KT+  +R++
Sbjct: 413 AWAGTGFGNLAIPRVGQEVIVDFLNGDPDQPIIMGRTYHQENRTPGSLPGTKTQMTIRSK 472

Query: 481 THQGEGFNELSFEDQAGKEQIYLHAQKDFDGLIENDHTTVIRHDHHLTVENDQFTQIKHN 540
            ++G GFNEL F+D  GKEQ+Y+HAQK+ +  + N+ TT + ++H  T+ N+Q   + +N
Sbjct: 473 NYKGSGFNELKFDDATGKEQVYIHAQKNMNTEVLNNRTTDVINNHAETIGNNQMIAVTNN 532

Query: 541 QHLTVEWESREAVTGEQVLSIEGSLHVKT 569
           Q  TV     E V   Q++++ GS+ V+T
Sbjct: 533 QIQTVGVNQIETVGSNQIINV-GSVQVET 560