Pairwise Alignments

Query, 1163 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 713 a.a., type VI secretion system effector VgrG from Escherichia coli ECRC100

 Score =  427 bits (1099), Expect = e-123
 Identities = 233/577 (40%), Positives = 337/577 (58%), Gaps = 13/577 (2%)

Query: 4   LAYSIEVEGLEDETLVVRGFHGQESLSNSVFLGQACYGFRYEVQLASRVSNLTAEQMVDK 63
           L +++EV+GL  +   V  FH  +SLS+   L  +         ++ +  +L  +Q++DK
Sbjct: 5   LRFTLEVDGLPPDAFAVVSFHLNQSLSSLFSLALSL--------VSQQFLSLEFQQILDK 56

Query: 64  RAELKLYRNSQLVQRVHGIVRAFSQGDIGHHHTFYQLTLVPALERLSLRHNSRIFQKQTV 123
            A L +++   + +RV G+V  F  G+   +   Y + + P L R  LR N RIFQ + +
Sbjct: 57  MAYLTIWQGDDVQRRVKGVVTWFELGENDKNQKLYSMKVCPPLWRTGLRQNFRIFQNEDI 116

Query: 124 PEILSILLQEMGINDYAFALKRDGVQREFCVQYRESDIDFLHRLAAEEGLVYSFVHEAGK 183
             IL  +LQE G+ +++         REFCVQY E+D DFL R+AAEEG+ +   H A K
Sbjct: 117 ASILGTILQENGVTEWSPLFSEPHPSREFCVQYGETDYDFLCRMAAEEGIFFYEEH-AQK 175

Query: 184 HTLYFSDASDSLSKLPEP--IPYNALVGGAIDTPYIHGLTYRTQAEVSEVQLKDYSFKKP 241
            T       D++  LPE   IP+N      + T  I    Y  Q   S V  KDY+FK+P
Sbjct: 176 STDQSLVLCDTVLYLPESFEIPWNPNTRTEVSTLCISQFRYSAQIRPSSVVTKDYTFKRP 235

Query: 242 AYSFLQTVQGTELDYQQTRYQHFDAPGRYKDDVNGAAFSQIRLDYLRRHAHTATGQSNEP 301
            ++     +G   DYQ+T+Y+ +D PGR+K   +G  F++ ++D  R +A  A G S  P
Sbjct: 236 GWAGRFDQEGQHQDYQRTQYEVYDYPGRFKG-AHGQNFARWQMDGWRNNAEVARGTSRSP 294

Query: 302 LLRAGYKFDLQEHLDPAMNRDWVVVSINHQGEQPQALQEDGGSGATTYSNQFSLIPGHLH 361
            +  G +  L  H    +NR+W VV+    GEQPQA+    GSG TT  N F++IP    
Sbjct: 295 EIWPGRRIVLTGHPQANLNREWQVVASELHGEQPQAVPGRRGSG-TTLDNHFAVIPADRT 353

Query: 362 WRAEPQPKPQVDGPMIATVVGPEGEEIFCDEHGRVKIHFPWDRYSNGNEQSSCWVRVSQG 421
           WR +P  KP VDGP  A V GP GEEIFCDEHGRV++ F WDRY+  N+ SSCW+RV+Q 
Sbjct: 354 WRPQPLLKPLVDGPQSAVVTGPAGEEIFCDEHGRVRVKFNWDRYNPSNQDSSCWIRVAQA 413

Query: 422 WAGSQYGFIAIPRIGHEVIVEFLNGDPDQPIITGRTYHATNTPPYTLPEHKTKTVLRTET 481
           WAG+ +G +AIPR+G EVIV+FLNGDPDQPII GRTYH  N  P +LP  KT+  +R++T
Sbjct: 414 WAGTGFGNLAIPRVGQEVIVDFLNGDPDQPIIMGRTYHQENRTPGSLPGTKTQMTIRSKT 473

Query: 482 HQGEGFNELSFEDQAGKEQIYLHAQKDFDGLIENDHTTVIRHDHHLTVENDQFTQIKHNQ 541
           ++G GFNEL F+D  GKEQ+Y+HAQK+ +  + N+ TT + ++H   + N+Q   + +NQ
Sbjct: 474 YKGSGFNELKFDDATGKEQVYIHAQKNMNTEVLNNRTTDVINNHAEKIGNNQAITVTNNQ 533

Query: 542 HLTVEWESREAVTGEQVLSIEGSLHVKTGKVWVNEAG 578
            L +     + V   QV ++  +  +K G   V + G
Sbjct: 534 ILNIGVNQIQTVGVNQVETVGSNQIIKVGSNQVEKVG 570