Pairwise Alignments

Query, 1163 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 618 a.a., type VI secretion system tip protein VgrG from Dickeya dianthicola ME23

 Score =  561 bits (1446), Expect = e-164
 Identities = 288/628 (45%), Positives = 391/628 (62%), Gaps = 25/628 (3%)

Query: 4   LAYSIEVEGLEDETLVVRGFHGQESLSNSVFLGQACYGFRYEVQLASRVSNLTAEQMVDK 63
           L ++++V  L + T  V  F   E+L+           F   + LAS  +++    ++D+
Sbjct: 7   LQFTVKVGALPETTFAVVDFELSEALNQP---------FALSLNLASSQADIDFGAVLDQ 57

Query: 64  RAELKLYRNSQLVQRVHGIVRAFSQGDIGHHHTFYQLTLVPALERLSLRHNSRIFQKQTV 123
             EL+++   +L +RV GIV  F+QGD G   T YQ  + PAL RL LR N+R+FQ +  
Sbjct: 58  PCELRVWYEGELQRRVSGIVSRFAQGDTGFRRTRYQAEVRPALWRLGLRTNARLFQTRKP 117

Query: 124 PEILSILLQEMGINDYAFALKRDGVQREFCVQYRESDIDFLHRLAAEEGLVYSFVHEAGK 183
             I+S LL+E GI D+AFAL+ D   RE+CVQYRESD+ F+HRLAAEEGL Y    EAGK
Sbjct: 118 DAIISTLLEEAGITDFAFALRHDHAAREYCVQYRESDLAFIHRLAAEEGLFYFHEFEAGK 177

Query: 184 HTLYFSDASDSLSKLPEPIPYNALVGGAIDTPYIHGLTYRTQAEVSEVQLKDYSFKKPAY 243
           H + F+D + +LSK PE + +N    G  +  Y+    Y      +EV LKDYSFK PAY
Sbjct: 178 HRVVFADDAGALSKGPE-LFFNLATQGLSEGAYVRRFRYAEAVSTAEVALKDYSFKTPAY 236

Query: 244 SFLQTVQGTELDYQQTRYQHFDAPGRYKDDVNGAAFSQIRLDYLRRHAHTATGQSNEPLL 303
             L     +ELD+Q+  YQHFD PGR+K D +G AF+  RLD LR  A T  G+SN   L
Sbjct: 237 GLLHNRMSSELDHQRESYQHFDYPGRFKQDPSGKAFTGYRLDALRAGAMTGAGESNAAAL 296

Query: 304 RAGYKFDLQEHLDPAMNRDWVVVSINHQGEQPQALQEDGGSGATTYSNQFSLIPGHLHWR 363
             G  F L EH + A N  W VV++ H G+QPQAL+E+ G   TT SN+F ++     WR
Sbjct: 297 MPGSSFTLTEHPNAAFNLAWQVVAVTHSGQQPQALEEESGGEPTTLSNRFEVVKATTTWR 356

Query: 364 AEPQPKPQVDGPMIATVVGPEGEEIFCDEHGRVKIHFPWDRYSNGNEQSSCWVRVSQGWA 423
           A    KP+VDGP IATVVGP GEEI+CD++GR+K+ FPWDRY   ++QSSCWVRVSQGWA
Sbjct: 357 AAMPYKPRVDGPQIATVVGPAGEEIYCDQYGRIKLQFPWDRYGASDDQSSCWVRVSQGWA 416

Query: 424 GSQYGFIAIPRIGHEVIVEFLNGDPDQPIITGRTYHATNTPPYTLPEHKTKTVLRTETHQ 483
           G QYG IAIPRIGHEV+V FL GDPDQPI+TGRT+HATN  PY LP +KT+T LRT TH+
Sbjct: 417 GGQYGLIAIPRIGHEVVVSFLEGDPDQPIVTGRTFHATNPSPYPLPANKTRTSLRTRTHK 476

Query: 484 GEGFNELSFEDQAGKEQIYLHAQKDFDGLIENDHTTVIRHDHHLTVENDQFTQIKHNQHL 543
           G GFNEL FEDQAG+E++++HAQKD + ++ N+ +T +   H   V  DQ   ++HNQ +
Sbjct: 477 GAGFNELRFEDQAGQEEVFIHAQKDMNTVVLNNRSTAVNASHSENVGGDQTVVVQHNQTV 536

Query: 544 TVEWESREAVTGEQVLSIEGSLHVKTGKVWVNEAGTEIHVKAGQKVVIEAGSEITVKAGG 603
           ++E      + G Q      +++V  G+   +   T+    +G   V+  G  I +   G
Sbjct: 537 SIEQNQHTGIKGTQ------NINVGNGR-QTSVTTTDTLTVSGDVTVVSTGGNIRLSTAG 589

Query: 604 SFVKVDPAG--------VHLSGALVNLN 623
            ++ +D AG        + L+G  ++LN
Sbjct: 590 GYISIDHAGDISIVGNHLMLNGVRIDLN 617