Pairwise Alignments

Query, 1163 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 617 a.a., type VI secretion system tip protein VgrG from Dickeya dianthicola ME23

 Score =  553 bits (1426), Expect = e-161
 Identities = 287/622 (46%), Positives = 387/622 (62%), Gaps = 13/622 (2%)

Query: 4   LAYSIEVEGLEDETLVVRGFHGQESLSNSVFLGQACYGFRYEVQLASRVSNLTAEQMVDK 63
           L +++++  L D T  V  F   E+L+           F   + LAS  +++    ++D+
Sbjct: 7   LQFTVKIGALPDTTFAVVDFELSEALNQP---------FALSLSLASSQADIDFGAVLDQ 57

Query: 64  RAELKLYRNSQLVQRVHGIVRAFSQGDIGHHHTFYQLTLVPALERLSLRHNSRIFQKQTV 123
             EL ++   +L +RV GIV  F+QGD G   T YQ  + PAL RL LR N+RIFQ Q  
Sbjct: 58  PCELAVWYEGELQRRVSGIVSRFAQGDTGFRRTRYQAEVRPALWRLGLRTNARIFQTQKP 117

Query: 124 PEILSILLQEMGINDYAFALKRDGVQREFCVQYRESDIDFLHRLAAEEGLVYSFVHEAGK 183
             I+  LL+E GI+D+AFAL+ D   RE+CVQYRESD+ F+HRLAAEEGL Y    EAGK
Sbjct: 118 DAIIGTLLEEAGISDFAFALRHDHAVREYCVQYRESDLAFIHRLAAEEGLFYFHEFEAGK 177

Query: 184 HTLYFSDASDSLSKLPEPIPYNALVGGAIDTPYIHGLTYRTQAEVSEVQLKDYSFKKPAY 243
           H + F+D + +L K PE + +N    G  +  Y+    Y      +EV LKDYSFK PAY
Sbjct: 178 HRVVFADDAGALPKGPE-LFFNLATQGLSEGAYVRRFRYAEAVSTAEVALKDYSFKTPAY 236

Query: 244 SFLQTVQGTELDYQQTRYQHFDAPGRYKDDVNGAAFSQIRLDYLRRHAHTATGQSNEPLL 303
             L      EL +Q+  YQHFD PGR+K D +G AF+  RLD LR  A T  G+SN   L
Sbjct: 237 GLLHKKTSNELAHQRESYQHFDYPGRFKQDPSGKAFTGYRLDALRAGAMTGAGESNAAAL 296

Query: 304 RAGYKFDLQEHLDPAMNRDWVVVSINHQGEQPQALQEDGGSGATTYSNQFSLIPGHLHWR 363
             G  F L EH +PA N  W VV++ H G+QPQAL+E+ G   TT SN F ++     WR
Sbjct: 297 MPGSSFTLTEHPNPAFNLAWQVVAVTHSGQQPQALEEESGGEPTTISNSFEVVKATTTWR 356

Query: 364 AEPQPKPQVDGPMIATVVGPEGEEIFCDEHGRVKIHFPWDRYSNGNEQSSCWVRVSQGWA 423
           A    KP+VDGP IA VVGP GEEI+CD+ GRVK+ FPWDRY   ++QSSCWVRVSQGWA
Sbjct: 357 AAMPYKPRVDGPQIAMVVGPAGEEIYCDKFGRVKLQFPWDRYGASDDQSSCWVRVSQGWA 416

Query: 424 GSQYGFIAIPRIGHEVIVEFLNGDPDQPIITGRTYHATNTPPYTLPEHKTKTVLRTETHQ 483
           G QYG IAIPRIGHEV+V FL GDPDQPI+TGRT+HATN  PY LP +KT+T LRT TH+
Sbjct: 417 GGQYGLIAIPRIGHEVVVSFLEGDPDQPIVTGRTFHATNPSPYPLPANKTRTSLRTSTHK 476

Query: 484 GEGFNELSFEDQAGKEQIYLHAQKDFDGLIENDHTTVIRHDHHLTVENDQFTQIKHNQHL 543
           G GFNEL FEDQAG+E++++HAQKD + ++ N+ +T +   H   V  DQ   ++HNQ +
Sbjct: 477 GAGFNELRFEDQAGQEEVFIHAQKDMNTVVLNNRSTAVNASHTENVGGDQTVVVQHNQTV 536

Query: 544 TVEWESREAVTGEQVLSIEGSLH--VKTGKVWVNEAGTEIHVKAGQKVVIEAGSEITVKA 601
           +V+      + GEQ +++  + H  V   +    +    I  ++G  ++  AG  I + +
Sbjct: 537 SVKENQVTEIQGEQTVAVTQNRHTTVNDNESLQVKNNIAIQSQSGDILIATAGGFIAIDS 596

Query: 602 GGSFVKVDPAGVHLSGALVNLN 623
            G+ + +   G+ L+G  ++LN
Sbjct: 597 EGN-ISITGKGLVLNGTRIDLN 617