Pairwise Alignments

Query, 1163 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 678 a.a., type VI secretion system tip protein VgrG from Dickeya dadantii 3937

 Score =  593 bits (1528), Expect = e-173
 Identities = 314/674 (46%), Positives = 412/674 (61%), Gaps = 49/674 (7%)

Query: 4   LAYSIEVEGLEDETLVVRGFHGQESLSNSVFLGQACYGFRYEVQLASRVSNLTAEQMVDK 63
           L +++++  L D T  V  F   E+L+           F   + LAS   ++    ++D+
Sbjct: 7   LQFTVKIGALADTTFAVVDFELSEALNQP---------FALSLSLASSQVDIDFGAVLDQ 57

Query: 64  RAELKLYRNSQLVQRVHGIVRAFSQGDIGHHHTFYQLTLVPALERLSLRHNSRIFQKQTV 123
             EL ++    L +RV GIV  F+QGD G   T YQ  + PAL RL LR N+RIFQ +  
Sbjct: 58  PCELMVWYEGALQRRVSGIVSRFAQGDTGFRRTRYQAEVRPALWRLGLRTNARIFQTKKP 117

Query: 124 PEILSILLQEMGINDYAFALKRDGVQREFCVQYRESDIDFLHRLAAEEGLVYSFVHEAGK 183
            EI++ LLQE GI+D+AF+L+ +   RE+CVQYRESD+ F++RLAAEEG+ Y    EAGK
Sbjct: 118 DEIITQLLQEAGISDFAFSLRHEHAVREYCVQYRESDLTFINRLAAEEGMFYFHEFEAGK 177

Query: 184 HTLYFSDASDSLSKLPEPIPYNALVGGAIDTPYIHGLTYRTQAEVSEVQLKDYSFKKPAY 243
           H + F+D + +L+K PE + +N    G  +  Y+    Y      +EV+LKDY FK PAY
Sbjct: 178 HRVVFADDAGALAKGPE-LFFNLATQGLSEGAYVRRFRYAEAVSTAEVELKDYCFKTPAY 236

Query: 244 SFLQTVQGTELDYQQTRYQHFDAPGRYKDDVNGAAFSQIRLDYLRRHAHTATGQSNEPLL 303
                    EL++Q+  YQHFD PGR+K D +G AF+  RLD LR  A T  G+SN   L
Sbjct: 237 GLSHKKTSNELEHQRESYQHFDYPGRFKQDPSGKAFTGYRLDALRADAITGVGESNAAEL 296

Query: 304 RAGYKFDLQEHLDPAMNRDWVVVSINHQGEQPQALQEDGGSGATTYSNQFSLIPGHLHWR 363
           R G  F L EH +P+ N  W VV++ H G+QPQAL+E+ G   TT SN F ++ G   WR
Sbjct: 297 RPGSAFTLTEHPNPSFNLAWQVVAVTHSGQQPQALEEESGGEPTTLSNSFEVVKGSTTWR 356

Query: 364 AEPQPKPQVDGPMIATVVGPEGEEIFCDEHGRVKIHFPWDRYSNGNEQSSCWVRVSQGWA 423
           A    KP VDGP IATVVGP GEEI+CD+ GRVK+ FPWDRY   ++QSSCWVRVSQGWA
Sbjct: 357 AALPYKPMVDGPQIATVVGPAGEEIYCDKFGRVKLQFPWDRYGASDDQSSCWVRVSQGWA 416

Query: 424 GSQYGFIAIPRIGHEVIVEFLNGDPDQPIITGRTYHATNTPPYTLPEHKTKTVLRTETHQ 483
           G QYG IAIPRIGHEV+V FL GDPDQP+ITGRT+HATN  PY LPEHKT+T LRT+TH+
Sbjct: 417 GGQYGLIAIPRIGHEVVVSFLEGDPDQPLITGRTFHATNPTPYVLPEHKTRTTLRTDTHK 476

Query: 484 GEGFNELSFEDQAGKEQIYLHAQKDFDGLIENDHTTVIRHDHHLTVENDQFTQIKHNQHL 543
           G GFNEL FED+A +EQIYLHAQKD D +I N H   +  D HL+V NDQF ++  + H 
Sbjct: 477 GSGFNELRFEDEATREQIYLHAQKDMDAVINNIHRQSVGLDQHLSVANDQFQRVDRHSHR 536

Query: 544 TVEWESREA------------------------VTGEQVLSIEGSLHVKTG--------- 570
           T+  +  E                         + G ++  IEGS               
Sbjct: 537 TIGQDDFEQIGQDHHQSIGRHLVQSITQSFKRFIGGGEITRIEGSRQTTLSGSEETLIGA 596

Query: 571 --KVWVNEAGTEIHVKAGQKVVIEAGSEITVKAGGSFVKVDPAGVHLSGALVNLNSGGSA 628
             +V VN   T+ ++KA   +V+EAG  +T+KA G F+K+D AGV +SG +V +N GGSA
Sbjct: 597 HQRVLVN---TDSYLKAAD-IVLEAGQSLTIKAPGGFIKIDGAGVTISGTVVKINDGGSA 652

Query: 629 GSGSGFGGAMPALP 642
           G+G+      P  P
Sbjct: 653 GAGTAPVSIEPEAP 666