Pairwise Alignments

Query, 172 a.a., type VI secretion system tube protein Hcp from Vibrio cholerae E7946 ATCC 55056

Subject, 171 a.a., Hcp family type VI secretion system effector from Pseudomonas fluorescens SBW25

 Score =  203 bits (517), Expect = 1e-57
 Identities = 97/170 (57%), Positives = 123/170 (72%), Gaps = 1/170 (0%)

Query: 1   MPTPCYISIEGQTQGLITAGACTADSIGDSFVEGHEDEMLVQQFDHVVTVPTDPQSGQPS 60
           MPTP Y+SI G  QGLITAG  T DS+G+ + EGHED++LVQ F H V +P DPQSGQP+
Sbjct: 1   MPTPAYLSITGVKQGLITAGTFTQDSVGNIYQEGHEDQILVQAFAHQVIIPRDPQSGQPT 60

Query: 61  GQRVHKPFKFTVALNKAVPLLYNALSSGEKLKTVELKWYRTSIEGKQENFFTTKLENASI 120
           GQRVHKP   +   +K+ PLL++AL+SGE++K   L+W RTS  G QE++FT +LE A+I
Sbjct: 61  GQRVHKPLMISKVFDKSSPLLFSALTSGEEVK-CRLEWLRTSSAGTQEHYFTIELEGATI 119

Query: 121 VDIHCEMPHCQDPAKSDFTQNVTVSLSYRKITWDHVNAGTSGSDDWRKPI 170
           VDI   MP+CQDP  + FT    V  +YRKI W H  +GTSGSDDWR P+
Sbjct: 120 VDIQSRMPNCQDPDNAHFTHLEDVYFTYRKIVWTHEVSGTSGSDDWRSPV 169