Pairwise Alignments

Query, 172 a.a., type VI secretion system tube protein Hcp from Vibrio cholerae E7946 ATCC 55056

Subject, 159 a.a., Hcp family type VI secretion system effector from Pectobacterium carotovorum WPP14

 Score = 99.4 bits (246), Expect = 3e-26
 Identities = 58/171 (33%), Positives = 92/171 (53%), Gaps = 14/171 (8%)

Query: 1   MPTPCYISIEGQTQGLITAGACTADSIGDSFVEGHEDEMLVQQFDHVVTVPTDPQSGQPS 60
           M    Y+++ G  QG I+A   T DSIG+ +  GH+D++ V QFDH ++           
Sbjct: 1   MANNIYLTLTGNQQGKISAECGTVDSIGNKYQIGHKDQIFVLQFDHAIS----------R 50

Query: 61  GQRV-HKPFKFTVALNKAVPLLYNALSSGEKLKTVELKWYRTSIEGKQENFFTTKLENAS 119
            Q + H+P  F   ++K+ PLL NA+S+ EKL+ +   +YRT+  G QE +++ KL  A 
Sbjct: 51  NQNINHQPITFCKPIDKSSPLLGNAISNNEKLELL-FDFYRTAQTGTQEKYYSVKLIGAV 109

Query: 120 IVDIHCEMPHCQDPAKSDFTQNVTVSLSYRKITWDHVNAGTSGSDDWRKPI 170
           I +I    PH    A++       +S++Y+ I W H  AGT G   W + +
Sbjct: 110 IRNIAVSYPHALTHAENQ--PEEMISVAYQSIDWQHHIAGTGGYSLWEEQV 158