Pairwise Alignments

Query, 172 a.a., type VI secretion system tube protein Hcp from Vibrio cholerae E7946 ATCC 55056

Subject, 159 a.a., type VI secretion system effector, Hcp1 family from Enterobacter asburiae PDN3

 Score = 88.2 bits (217), Expect = 6e-23
 Identities = 44/142 (30%), Positives = 72/142 (50%), Gaps = 4/142 (2%)

Query: 27  IGDSFVEGHEDEMLVQQFDHVVTVPTDPQSGQPSGQRVHKPFKFTVALNKAVPLLYNALS 86
           +G   V G E  + ++ F H V +P D  +G+ +G R+H P  F    ++  P+L+ ALS
Sbjct: 18  VGPCLVSGREGAIELKSFTHNVNIPVDGNTGKLTGTRIHMPVMFQKEFDRVTPILFRALS 77

Query: 87  SGEKLKTVELKWYRTSIEGKQENFFTTKLENASIVDIHCEMPHCQDPAKSDFTQNVTVSL 146
           +G  L++  +K Y+ +  G ++ +F   LEN  I  I  ++     P  +  T   TV +
Sbjct: 78  TGRTLQSATIKMYQINEAGFEQEYFNILLENVKITSITPDL----YPGANTGTHLETVLI 133

Query: 147 SYRKITWDHVNAGTSGSDDWRK 168
            Y KITW H +     SD W +
Sbjct: 134 RYEKITWKHCDGNVIYSDSWNE 155