Pairwise Alignments

Query, 172 a.a., type VI secretion system tube protein Hcp from Vibrio cholerae E7946 ATCC 55056

Subject, 172 a.a., Major exported protein from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  271 bits (694), Expect = 3e-78
 Identities = 126/172 (73%), Positives = 150/172 (87%)

Query: 1   MPTPCYISIEGQTQGLITAGACTADSIGDSFVEGHEDEMLVQQFDHVVTVPTDPQSGQPS 60
           MPTPCYISI GQTQG ITAGA TADS+G+ +V+GHEDEMLVQ+F H VTVPTDPQSGQP+
Sbjct: 1   MPTPCYISITGQTQGNITAGAFTADSVGNIYVQGHEDEMLVQEFLHNVTVPTDPQSGQPA 60

Query: 61  GQRVHKPFKFTVALNKAVPLLYNALSSGEKLKTVELKWYRTSIEGKQENFFTTKLENASI 120
           GQR HKPF FTVALNKAVPL+YNAL+SGE L T EL W+RTS+EGKQE++FTT+L +++I
Sbjct: 61  GQRAHKPFIFTVALNKAVPLMYNALASGEMLPTTELHWWRTSVEGKQEHYFTTRLTDSTI 120

Query: 121 VDIHCEMPHCQDPAKSDFTQNVTVSLSYRKITWDHVNAGTSGSDDWRKPIEA 172
           VD+   MPHCQDPAK +FTQ + VSL+YRKI W+HV +GTSG+DDWR P+EA
Sbjct: 121 VDMKLHMPHCQDPAKREFTQLLEVSLAYRKIEWEHVKSGTSGADDWRAPLEA 172